Job Description P06992 Confidence 98.29% Date Thu Jan 5 10:59:48 GMT 2012 Rank 240 Aligned Residues 82 % Identity 9% Template c2cmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from helicobacter2 pylori Resolution 2.0 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		V	S	A	I	N	P	Q	K	G	Q	A	M	V	E	I	G	P	G	L	A	A	L	T	E	P	V	G	E	R	L	D	Q	L	T	V	I	E	L	D	R	D	L	A	A	R	L	Q	T	H	P	F	.	.	L	G	P	K	L	T	I	Y	Q	Q	D	A	M	T	F	N	F	G	E	L	A	E	K	M	G	Q	P
Query Conservation																																																					.	.
Alig confidence																																																					.	.																.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		M	G	G	C	T	K	K	E	L	K	E	V	L	I	V	D	G	F	D	L	E	L	A	H	Q	L	F	K	Y	D	T	H	I	D	F	V	Q	A	D	E	K	I	L	D	S	F	I	S	F	F	P	H	F	H	E	V	K	N	N	K	N	F	T	H	A	K	Q	L	.	.	.	.	L	D	L	D	I	K	K	Y
Template Known Secondary structure					T	T	S	S									S	S										T	T	S	S								S						G	G	G	T	T	T	S	T	T						T		T	T					S	S	G	.	.	.	.	G	G	S
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140
		108	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	F	G	N	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	I	F	C	L	Q	E
Template Known Secondary structure							S	S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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