Phyre 2 alignment of P31455 with d2ovrb2

Job Description P31455
Confidence 99.76% Date Thu Jan 5 11:47:46 GMT 2012

Rank 75 Aligned Residues 331

% Identity 8% Template d2ovrb2

SCOP info 7-bladed beta-propeller WD40 repeat-like WD40-repeat

Resolution 2.50

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	Q	D	R	A	M	K	Q	I	T	F	A	P	R	N	H	L	L	T	N	T	N	T	W	T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K
Query Conservation
Alig confidence																						.																	.	.	.	.	.	.	.																			.														.	.	.
Template Conservation																						.																	.	.	.	.	.	.	.																			.														.	.	.
Template Sequence	W	R	R	G	E	L	K	S	P	K	V	L	K	G	H	D	D	H	V	I	T	.	C	L	Q	F	C	G	N	R	I	V	S	G	S	D	D	N	.	.	.	.	.	.	.	T	L	K	V	W	S	A	V	T	G	K	C	L	R	T	L	V	G	.	H	T	G	G	V	W	S	S	Q	M	R	D	N	.	.	.
Template Known Secondary structure			S	S											S	T	T	S				.						T	T							T	T	S	.	.	.	.	.	.	.							T	T	T										.		S	S									T	T	.	.	.
Template Predicted Secondary structure																						.																	.	.	.	.	.	.	.																			.														.	.	.
Template SS confidence
	2365	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.		.	.	.	.	2390	.	.	.	.	.	.	.	.	.	2400	.								.	.	.	.	.	.	.	.	2410	.	.	.	.	.	.	.	.	.		2420	.	.	.	.	.	.	.	.	.	2430	.	.

	87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L
Query Conservation
Alig confidence	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	S	G	S	T	D	R	T	L	K	V	W	N	A	E	T
Template Known Secondary structure	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S							T	T	T
Template Predicted Secondary structure	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			2433																																																													.	.	.	.	.	.	2440	.	.	.	.	.	.	.	.	.	2450

	167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence	G	E	C	I	H	T	L	Y	G	H	T	S	T	V	R	C	M	H	L	H	E	K	R	V	V	S	G	S	R	D	A	T	L	R	V	W	D	I	E	T	G	Q	C	L	H	V	L	M	G	H	V	A	A	V	R	C	V	Q	Y	D	G	R	R	V	V	S	G	A	Y	D	F	M	V	K	V	W	D	P	E	T
Template Known Secondary structure	T										S	S									T	T							T	T	S							S	S	S											S	S									S	S							T	T	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
	2451	.	.	.	.	.	.	.	.	2460	.	.	.	.	.	.	.	.	.	2470	.	.	.	.	.	.	.	.	.	2480	.	.	.	.	.	.	.	.	.	2490	.	.	.	.	.	.	.	.	.	2500	.	.	.	.	.	.	.	.	.	2510	.	.	.	.	.	.	.	.	.	2520	.	.	.	.	.	.	.	.	.	2530

	247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L
Query Conservation
Alig confidence																																																																				.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence	E	T	C	L	H	T	L	Q	G	H	T	N	R	V	Y	S	L	Q	F	D	G	I	H	V	V	S	G	S	L	D	T	S	I	R	V	W	D	V	E	T	G	N	C	I	H	T	L	T	G	H	Q	S	L	T	S	G	M	E	L	K	D	N	I	L	V	S	G	.	.	.	.	N	A	D	S	T	V	K	I	W
Template Known Secondary structure	T										S	S									S	S							T	T	S							T	T	T												S									T	T						.	.	.	.		T	T	S
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
	2531	.	.	.	.	.	.	.	.	2540	.	.	.	.	.	.	.	.	.	2550	.	.	.	.	.	.	.	.	.	2560	.	.	.	.	.	.	.	.	.	2570	.	.	.	.	.	.	.	.	.	2580	.	.	.	.	.	.	.	.	.	2590	.	.	.	.	.	.	.					.	.	2600	.	.	.	.	.	.

	327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.				.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																				.																					.	.	.
Query SS confidence																																				.																					.	.	.
Query Sequence	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	.	.	.	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W
Query Conservation																																				.																					.	.	.
Alig confidence																																				.																					.	.	.
Template Conservation
Template Sequence	D	I	K	T	G	Q	C	L	Q	T	L	Q	G	P	N	K	H	Q	S	A	V	T	C	L	Q	F	N	K	N	F	V	I	T	S	S	D	D	G	T	V	K	L	W	D	L	K	T	G	E	F	I	R	N	L	V	T	L	E	S	G	G	S	G	G	V	V	W	R	I	R	A	S	N	T	K	L	V	C	A	V
Template Known Secondary structure		T	T	T									S	T	T	S		S	S									S	S							T	T	S							T	T	T											T	T	G	G	G	T										S	S
Template Predicted Secondary structure
Template SS confidence
	2607	.	.	2610	.	.	.	.	.	.	.	.	.	2620	.	.	.	.	.	.	.	.	.	2630	.	.	.	.	.	.	.	.	.	2640	.	.	.	.	.	.	.	.	.	2650	.	.	.	.	.	.	.	.	.	2660	.	.	.	.	.	.	.	.	.	2670	.	.	.	.	.	.	.	.	.	2680	.	.	.	.	.	.

	403	.		.	.	.					.	.	410	.	.	.	.	.
Predicted Secondary structure			.				.	.	.	.
Query SS confidence			.				.	.	.	.
Query Sequence	M	E	.	G	G	Q	.	.	.	.	L	W	I	T	E	T	D	R
Query Conservation			.				.	.	.	.
Alig confidence			.				.	.	.	.
Template Conservation
Template Sequence	G	S	R	N	G	T	E	E	T	K	L	L	V	L	D	F	D	V
Template Known Secondary structure			S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
	2687	.	.	2690	.	.	.	.	.	.	.	.	.	2700	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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