Phyre 2 alignment of P31455 with d1v04a

Job Description P31455
Confidence 98.83% Date Thu Jan 5 11:47:46 GMT 2012

Rank 129 Aligned Residues 278

% Identity 8% Template d1v04a_

SCOP info 6-bladed beta-propeller Calcium-dependent phosphotriesterase Serum paraoxonase/arylesterase 1, PON1

Resolution 2.2

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.									.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.																						.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.																						.	.	.	.	.	.	.	.
Query Sequence	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	.	.	.	.	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	.	.	.	.	.	.	.	.	P	V	N	V	Q	K	Q	H	P
Query Conservation																																							.	.	.	.																						.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	V	T	P	V	E	L	P	N	C	N	L	V	K	G	I	D	N	G	S	E	D	L	E	I	L	P	N	G	L	A	F	I	S	S	G	L	K	Y	D	K	S	G	K	I	L	L	M	D	L	N	E	K	E	P	A	V	S	E	L	E	I	I	G	N	T	L	D	I	S	S	F	N	P	H	G	I	S	T	F	I
Template Known Secondary structure				B			S	S					T	T			S									T	T	S																					T	T	S	S	S											S	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
	34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

	188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	.	.	.	.	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P
Query Conservation																																								.	.	.	.
Alig confidence																																								.	.	.	.																																.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.
Template Sequence	D	D	D	N	T	V	Y	L	L	V	V	N	H	P	G	S	S	S	T	V	E	V	F	K	F	Q	E	E	E	K	S	L	L	H	L	K	T	I	R	H	K	L	L	P	S	V	N	D	I	V	A	V	G	P	E	H	F	Y	A	T	N	D	H	Y	F	I	D	P	Y	L	K	S	W	E	.	.	.	.	.	.
Template Known Secondary structure		T	T											S	T	T											T	T	T	T											T	T		S	S									T	T							S		S			S								.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.
Template SS confidence
	122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

	264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D
Query Conservation
Alig confidence	.	.	.	.	.	.	.	.																																									.
Template Conservation	.	.	.	.	.	.	.	.																																									.
Template Sequence	.	.	.	.	.	.	.	.	M	H	L	G	L	A	W	S	F	V	T	Y	Y	S	P	N	D	V	R	V	V	A	E	G	F	D	F	A	N	G	I	N	I	S	P	D	G	K	Y	V	.	Y	I	A	E	L	L	A	H	K	I	H	V	Y	E	K	H	A	N	W	T	L	T	P	L	R	V	L	S	F	D	T
Template Known Secondary structure	.	.	.	.	.	.	.	.			T	T											S	S										S	S								T	T	S	S			.					G	G	G	T									T	T	S											S	S
Template Predicted Secondary structure	.	.	.	.	.	.	.	.																																									.
Template SS confidence
									196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

	344	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.																			.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure										.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	I	Q	S	A	F	N	W	H	P	.	S	G	E	W	L	G	F	V	L	D	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W	M	E
Query Conservation										.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	L	V	D	N	I	S	V	D	P	V	T	G	D	L	W	V	G	C	H	P	N	G	M	R	I	F	F	Y	D	A	E	N	P	P	G	S	E	V	L	R	I	Q	D	I	L	S	E	E	P	K	V	T	V	V	Y	A	E	N	G	T	V	L	Q	G	S	T	V	A	A	V	Y	K	G	K	L	L	I	G	T	V
Template Known Secondary structure									T	T	T									S							S			T	T	S												T	T	S	S	S											S	S	S	S		S								T	T							S
Template Predicted Secondary structure
Template SS confidence
	267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

	405	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	G	Q	L	W	I	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence	F	H	K	A	L	Y	C	D
Template Known Secondary structure	S	S
Template Predicted Secondary structure
Template SS confidence
	347	.	.	350	.	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions