Job Description P31455 Confidence 91.26% Date Thu Jan 5 11:47:46 GMT 2012 Rank 167 Aligned Residues 320 % Identity 10% Template d1mdah_ SCOP info 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Methylamine dehydrogenase, H-chain Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V
Query Conservation
Alig confidence								.	.																							.	.	.																												.	.	.	.	.
Template Conservation								.	.																							.	.	.																												.	.	.	.	.
Template Sequence		I	S	R	R	S	H	.	.	I	T	L	P	A	Y	F	A	G	T	T	E	N	W	V	S	C	A	G	C	G	V	.	.	.	T	L	G	H	S	L	G	A	F	L	S	L	A	V	A	G	H	S	G	S	D	F	A	L	A	S	T	.	.	.	.	.	S	F	A	R	S	A	K	G	K	R	T	D	Y	V	E
Template Known Secondary structure			T	T				.	.					T	T	T		S	S								T	T	T	T		.	.	.									T	T							T	T	S	S								.	.	.	.	.			T	T	T	T	S	S	S
Template Predicted Secondary structure								.	.																							.	.	.																												.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.						.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	.	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S
Query Conservation																		.
Alig confidence																		.																																																												.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		V	F	D	P	V	T	F	L	P	I	A	D	I	E	L	P	D	A	P	R	F	S	V	G	P	R	V	H	I	I	G	N	C	A	S	S	A	C	L	L	F	F	L	F	G	S	S	A	A	A	G	L	S	V	P	G	A	S	D	D	Q	L	T	K	S	A	S	C	F	H	I	H	P	G	A	A	.	.	.	.
Template Known Secondary structure					T	T	T										T	T	S		S				S			T	T	S					T	T	S	S								S	S	S								T	T	T									S	S									T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	.	.	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T
Query Conservation																											.	.
Alig confidence		.																									.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	A	T	H	Y	L	G	S	C	P	A	S	L	A	A	S	D	L	A	A	A	P	A	A	A	G	I	V	G	A	Q	C	T	G	A	Q	N	C	S	S	Q	A	A	Q	A	N	Y	P	G	M	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	A	V	A	S	S	I	L
Template Known Secondary structure		.	T								T	T	S								S	S											S		T	T	S		B		S						T	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	S	S
Template Predicted Secondary structure		.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																					.	.	.	230	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320						.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																									.	.																													.	.	.	.	.
Query SS confidence																									.	.																													.	.	.	.	.
Query Sequence		T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	.	.	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	.	.	.	.	.	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T
Query Conservation																									.	.																													.	.	.	.	.
Alig confidence																									.	.																													.	.	.	.	.																				.
Template Conservation																																																																															.
Template Sequence		Q	G	D	I	P	A	A	G	A	T	M	K	A	A	I	D	G	N	E	S	G	R	K	A	D	N	F	R	S	A	G	F	Q	M	V	A	K	L	K	N	T	D	G	I	M	I	L	T	V	E	H	S	R	S	C	L	A	A	A	E	N	T	S	S	V	T	A	S	V	G	Q	T	S	G	P	I	S	.	N	G
Template Known Secondary structure							S	S										S	S		T					T	T					S	S	S						T	T	T	T										S	S		T	T	S										S	S	S									.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.				.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	.	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A
Query Conservation																					.	.	.
Alig confidence																					.	.	.
Template Conservation
Template Sequence		H	D	S	D	A	I	I	A	A	Q	D	G	A	S	D	N	Y	A	N	S	A	G	T	E	V	L	D	I	Y	D	A	A	S	D	Q	D	Q	S	S	V	E	L	D	K	G	P	E	S	L
Template Known Secondary structure												S	S	S								T	T	T	T							S	S	S											S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions