Job Description P31455 Confidence 99.96% Date Thu Jan 5 11:47:46 GMT 2012 Rank 6 Aligned Residues 323 % Identity 10% Template d1k32a3 SCOP info 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Resolution 2.00

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		24	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	T	N	T	N	T	W	T	P	.	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y
Query Conservation											.
Alig confidence											.										.	.	.	.	.	.	.	.																		.	.	.																												.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.																		.	.	.																												.	.	.	.	.	.
Template Sequence		S	K	F	A	E	D	F	S	P	L	D	G	D	L	I	A	F	V	S	.	.	.	.	.	.	.	.	R	G	Q	A	F	I	Q	D	V	S	G	T	Y	V	L	K	V	.	.	.	P	E	P	L	R	I	R	Y	V	R	R	G	G	D	T	K	V	A	F	I	H	G	T	R	E	G	D	.	.	.	.	.	.
Template Known Secondary structure		G	G	G								G	G	G							.	.	.	.	.	.	.	.	T	T							T	T	S	S	S					.	.	.	S			S									S	S	S									T	T			.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.																		.	.	.																												.	.	.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.									.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.				.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	G	I	Y	D	Y	R	T	G	K	A	E	K	F	E	E	N	L	G	N	V	F	A	M	G	V	D	R	N	G	K	F	A	V	V	A	N	D	R	F	E	I	M	T	V	D	L	E	T	G	K	P	T	V	I	E	R	S	R	E	A	M	I	T	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T												S								T	T	S	S							T	T	S							T	T	T										S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	.	.	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G
Query Conservation																					.	.
Alig confidence																					.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	T	I	S	D	N	S	R	F	I	A	Y	G	F	P	L	K	H	G	E	T	D	G	Y	V	M	Q	A	I	H	V	Y	D	M	E	G	R	K	I	F	A	A	T	T	E	N	S	H	D	Y	A	P	A	F	D	A	D	S	K	N	L	Y	Y	L	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	S											S	S	T	T		S											T	T	T	T						S		S	S	S	B								T	T	S								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.												.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	.	.	.	.	.	.	.	.	.	.	.	N	G	I	V	Q	L	W	L	I	S	P
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	L	D	P	S	P	D	R	V	V	L	N	F	S	F	E	V	V	S	K	P	F	V	I	P	L	I	P	G	S	P	N	P	T	K	L	V	P	R	S	M	T	S	E	A	G	E	Y	D	L	N	D	M	Y	K	R	S	S	P	I	N	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S	S	S						S		B							S	S	T	T				G	G	G				G	G	G	S									T	T	G	G	G	G					S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.					.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.
Predicted Secondary structure																																		.	.	.	.																																										.
Query SS confidence																																		.	.	.	.																																										.
Query Sequence		Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	.	.	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W	.	M	E
Query Conservation																																		.	.	.	.																																										.
Alig confidence											.																							.	.	.	.																		.	.	.	.	.	.																			.
Template Conservation											.																																												.	.	.	.	.	.
Template Sequence		D	P	G	D	Y	R	M	I	I	.	P	L	E	S	S	I	L	I	Y	S	V	P	V	H	G	E	F	A	A	Y	Y	Q	G	A	P	E	K	G	V	L	L	K	Y	D	V	K	T	R	K	V	T	E	V	.	.	.	.	.	.	K	N	N	L	T	D	L	R	L	S	A	D	R	K	T	V	M	V	R	K	D
Template Known Secondary structure				B							.			S	S												S																			T	T	T							.	.	.	.	.	.											T	T	S								T
Template Predicted Secondary structure											.																																												.	.	.	.	.	.
Template SS confidence
		581	.	.	.	.	.	.	.	.		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.							.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
		405	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	Q	L	W	I	T	E	T	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	K	I	Y	T	F	P	L	E	K
Template Known Secondary structure		T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		654	.	.	.	.	.	660	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions