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Job DescriptionP31455
Confidence98.44%DateThu Jan 5 11:47:46 GMT 2012
Rank143Aligned Residues392
% Identity11%Templated1flga_
SCOP info8-bladed beta-propeller Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  GPVLYQDRAMKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQGAHVGVVTVHP
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Template Sequence  GKRLWTYNHRLPDDIRPCCDVVNRGAAI. . YGDKVFFGTLDA. . . . . . . SVVALNKNTGKVVWKKKFADHGAGYTMTGAP
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TT


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..TTTTT.......SSS


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GGGT
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   88.90.........100.........110..... ....120....... ..130.........140.........150........
 
   83......90.........100.........110.........120........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KSEKYVFIHGPENPDETWHYDFHHRRGVIVEGGKMSNLDAMDITAP
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Template Sequence  TIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVE
Template Known Secondary structure 
TTT



B
GGG

B

TTT

SSTT
TTSS
TT
TTS
B
TTSTTSB
G
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   159160.........170.........180.........190.........200.........210.........220.........230........
 
   129130.........140.........150....... ..160.........170.......
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Query Sequence  YTPGVLRGGSHVHVFSPNGERVSFTYNDH. . . . . . . . . . . . . . . . . . . . . . . . VMHELDPALDLRNVGVAAPF. . . . . . .
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Template Sequence  SWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFS
Template Known Secondary structure  GGGG
B



S

TTTT

BSSS
GGGGS
TTS
STT


TT
S
TTT

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   239240.........250.........260.........270.........280.........290.........300.........310........
 
   178.180.........190.........200.........210.........220.........230.........240.........250.......
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Query Sequence  GPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWK
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Template Conservation      
 
       
     
      
 
  
    
                                          
Template Sequence  GNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKH
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SSS

TTSTTT

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S
TTT


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   319320.........330.........340.........350.........360.........370.........380.........390........
 
   258.260......... 270.........280.........290.........300.........310.........320.........330..
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Query Sequence  AAGDAPLSGTET. . . . . TLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGG
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Template Sequence  GKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMY. . DDHVGSLRAMDPVSG
Template Known Secondary structure 


SS
TT
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TTS



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   399400.........410.........420.........430.........440.........450.........460. ........470......
 
   333......340.........350.........360.........370.........380.........390........ .400......
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Query Sequence  EPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTEHHANSPSADAVVFSPDGQ. WLAWMEGG
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Template Sequence  KVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK. ELWKFQTGSGIVSPPITWEQDGEQYLGVTVGY
Template Known Secondary structure 
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S

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   477..480.........490.........500.........510........ .520.........530.........540.........550
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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