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Job DescriptionP31455
Confidence96.23%DateThu Jan 5 11:47:46 GMT 2012
Rank156Aligned Residues343
% Identity10%Templatec3tc9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hypothetical hydrolase; PDBTitle: crystal structure of a hypothetical hydrolase (bt_3476) from2 bacteroides thetaiotaomicron vpi-5482 at 2.23 a resolution
Resolution2.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930... ......40.........50.........60.........70.........80.........90.........100....
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Query Sequence  TWTPD. . . . SQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQGAHVGVVTVHPKSEKYVFIHGPENPDETWHYDF
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Template Sequence  EFSPKEGGLGTRXLLYGENFGSDISKIKVT. . . IGGQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILNDEGEEIANTEAN
Template Known Secondary structure 
S
TT



S
GGG...TT

SS

TT
TT


TTS

S
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   4950.........60.........70........ .80.........90.........100.........110.........120.....
 
   105....110.........120........ .130.........140..... ....150.........160.........170......
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Query Sequence  HHRRGVIVEGGKMSNLDAMDITAP. . . . . . . YTPGVLRGGSHVHVFSP. NGERVSFTYNDHVMHELDPALDLRNVGVAAP
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Template Sequence  EKFVYQKKXLVTTFLGTXYDGNTKYDLKDGPFDDCGGFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY. VSTVYSG
Template Known Secondary structure  S







BTTTTB

B

TTS
B

S


TTBTTTTT.

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   126...130.........140.........150.........160.........170.........180.........190....... ..200....
 
   177..180.........190.........200.........210.........220.........230.........240.........250......
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Query Sequence  FGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGW
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Template Sequence  LSKVRTICWTHEADS. XIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSWN. . . . . . . . . .
Template Known Secondary structure 
S

TTSS.

S
TTSGGGTS
S
SS



TTT

TT..........
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   205....210......... 220.........230.........240.........250.........260.........270...
 
   257..260.........270.........280.........290.........300.........310.........320.........330......
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Query Sequence  KAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQ
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Template Sequence  . . . . . . . . . . AGQVFRYDFTTQETTPLFTIQ. . . . . . . DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTP
Template Known Secondary structure  ..........TT
TTT


S.......SSS


TTSSTTTTTTTT


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   274.....280.........290.... .....300.........310.........320.........330......
 
   337..340....... ..350.........360. ........370.........380
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Query Sequence  LTHNKTDIQSA. . . . . . . . . . . . . . . . . . . . . . . . . FNWHPSGEWLGFVL. DNRIACAHAQSGEVEYLTE. . . . . . . . . .
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Template Sequence  YIVCGQQGAKDWVDGVGKKARXHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT. PQGRVTTFAGRGSNGTSGYN
Template Known Secondary structure 
TT
B

B
GGG
BBSS
GGGTTSS

GGGT
.TTS

TT
SBS
B
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   337..340.........350.........360.........370.........380.........390..... ....400.........410.....
 
   381........390.........400....
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Query Sequence  . . . . . HHANSPSADAVVFSPDGQWLAWME
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Template Sequence  DGDLRQEARFNHPEGIVYDEERECFFIGD
Template Known Secondary structure 
TTTT
BBSSTTTT
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   416...420.........430.........440....
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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