Job Description P31455 Confidence 99.56% Date Thu Jan 5 11:47:46 GMT 2012 Rank 102 Aligned Residues 300 % Identity 11% Template c3sbrF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nitrous-oxide reductase; PDBTitle: pseudomonas stutzeri nitrous oxide reductase, p1 crystal form with2 substrate Resolution 2.24 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	L	L	T	N	T	N	T	W	T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W
Query Conservation
Alig confidence																												.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		H	H	P	H	I	S	M	T	D	G	K	Y	D	G	K	Y	L	F	I	N	D	K	A	N	S	R	.	.	.	.	.	.	V	A	R	I	R	L	D	I	M	K	C	D	K	M	I	T	V	P	N	V	Q	A	I	H	G	L	R	L	Q	K	V	P	H	T	K	Y	V	F	A	N	A	E	F	I	I	P	H	P
Template Known Secondary structure										T	T												T	T	T	T		.	.	.	.	.	.						T	T	T	T									T	T												S	S	B														S	S
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.							.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	.	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P
Query Conservation																																																							.
Alig confidence																																						.																	.																									.	.
Template Conservation																																						.																																										.	.
Template Sequence		N	D	G	K	V	F	D	L	Q	D	E	N	S	Y	T	M	Y	N	A	I	D	A	E	T	M	E	M	A	F	Q	V	I	V	D	G	N	.	L	D	N	T	D	A	D	Y	T	G	R	F	A	A	A	T	C	Y	N	S	E	K	A	F	D	L	G	G	M	M	R	N	E	R	D	W	V	V	V	F	D	.	.
Template Known Secondary structure			S	S	S				T	T	S	T	T										T	T	T		S								S	S		.								S	S	S	S							S		T	T			S	S					T		S	S									.	.
Template Predicted Secondary structure																																						.																																										.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	A	V	E	A	A	V	K	A	G	D	F	I	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T			B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.											.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	.	.	.	.	.	.	.	.	.	.	P
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.																	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.																	.
Template Sequence		L	G	D	S	K	T	P	V	L	D	G	R	K	K	D	G	K	D	S	K	F	T	R	Y	V	P	V	.	.	.	.	.	.	.	.	.	P	K	N	P	H	G	C	N	T	S	S	D	G	K	Y	F	.	I	A	A	G	K	L	S	P	T	C	S	M	I	A	I	D	K	L	P	D	L	F	A	G	K	L	A
Template Known Secondary structure			T	T									S		B	T	T	B			S	S							.	.	.	.	.	.	.	.	.	S	S	S								T	T	S				.					T	T	S	S	B						G	G	G						T	T			S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.										.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.								.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.							.	.
Predicted Secondary structure																																		.													.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence																																		.													.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	D	N	R	I	A	C	A	H	A	Q	S	G	.	.	.	.	.	.	.	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	.	.	.	.	.	.	S	P
Query Conservation																																		.													.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence																																		.													.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation
Template Sequence		D	P	R	D	V	I	V	G	E	P	E	L	G	L	G	P	L	H	T	T	F	D	G	R	G	N	A	Y	T	T	L	F	I	D	S	Q	V	V	K	W	N	M	E	E	A	V	R	A	Y	K	G	E	K	V	N	Y	I	K	Q	K	L	D	V	H	Y	Q	P	G	H	L	H	A	S	L	C	E	T	N	E	A
Template Known Secondary structure			G	G	G	G						B			S									S	S	S							T	T	T	T															T	T													S	S								T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		396	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	Q	W	L	A	W	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	K	W	L	V	A	L	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions