Job Description P31455 Confidence 74.93% Date Thu Jan 5 11:47:46 GMT 2012 Rank 170 Aligned Residues 164 % Identity 12% Template c3s94A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:low-density lipoprotein receptor-related protein 6; PDBTitle: crystal structure of lrp6-e1e2 Resolution 2.80 Å

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		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L
Query Conservation
Alig confidence																																																					.																				.	.	.
Template Conservation																																																					.																				.	.	.
Template Sequence		D	L	R	L	V	D	A	T	V	G	G	L	E	D	A	A	A	V	D	F	V	F	S	H	G	L	I	Y	W	S	D	V	S	E	E	A	I	K	R	T	E	F	V	Q	N	V	V	V	S	G	L	.	L	S	P	D	G	L	A	C	D	W	L	G	E	K	L	Y	W	T	D	.	.	.	S	E	T	N	R	I
Template Known Secondary structure		B									B			S									T	T	T	T							T	T	T	T														S	S		.	S									T	T	T	T							.	.	.	T	T	T	T
Template Predicted Secondary structure																																																					.																				.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.				.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	.	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.																		.	.
Template Conservation																																																											.	.
Template Sequence		E	V	S	N	L	D	G	S	L	R	K	V	L	F	W	Q	E	L	D	Q	P	R	A	I	A	L	D	P	S	S	G	F	M	Y	W	T	D	W	G	E	V	P	K	I	E	R	A	G	M	D	G	S	S	R	F	I	I	.	.	I	N	S	E	I	Y	W	P	N	G	L	T	L	D	Y	E	E	Q	K	L	Y
Template Known Secondary structure						T	T	S		S							S	S		S									T	T	T	T								S	S	S								T	T	S		S					.	.			S	S		S	S								T	T	T	T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	M	E	G	G	Q	L	W	I	T	E	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	A	D	A	K	L	N	F	I	H	K	S	N
Template Known Secondary structure					T	T	T							S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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