Job Description P31455 Confidence 99.69% Date Thu Jan 5 11:47:46 GMT 2012 Rank 91 Aligned Residues 274 % Identity 9% Template c3ow8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:wd repeat-containing protein 61; PDBTitle: crystal structure of the wd repeat-containing protein 61 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P
Query Conservation
Alig confidence																					.	.	.																																														.	.	.	.
Template Conservation																					.	.	.																																														.	.	.	.
Template Sequence		G	I	L	F	K	Q	E	Q	A	H	D	D	A	I	W	S	V	A	W	.	.	.	G	E	T	V	V	T	G	S	L	D	D	L	V	K	V	W	K	W	R	D	E	R	L	D	L	Q	W	S	L	E	G	H	Q	L	G	V	V	S	V	D	I	S	H	T	L	.	.	.	.	P	I	A	A	S	S	S	L	D
Template Known Secondary structure								T	T	S	S	S	S								.	.	.									T	T	S									T	T												S	S									S	S	S	.	.	.	.	S							T	T
Template Predicted Secondary structure																					.	.	.																																														.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	.	.	.	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R
Query Conservation																																											.	.	.
Alig confidence																						.																					.	.	.
Template Conservation																						.
Template Sequence		A	H	I	R	L	W	D	L	E	N	G	K	Q	I	K	S	I	D	A	G	.	P	V	D	A	W	T	L	A	F	S	P	D	S	Q	Y	L	A	T	G	T	H	V	G	K	V	N	I	F	G	V	E	S	G	K	K	E	Y	S	L	D	T	R	G	K	F	I	L	S	I	A	Y	S	P	D	G	K	Y	L	A
Template Known Secondary structure		S							T	T	T	T										.	T	T									T	T	S	S							T	T	S							T	T	T		S								S	S	S									T	T	S	S
Template Predicted Secondary structure																						.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.												.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	T	F	T	H	H	R	A	Y	P	G	L	V	.	.	.	.	.	.	.	.	.	.	.	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W
Query Conservation																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		S	G	A	I	D	G	I	I	N	I	F	D	I	A	T	G	K	L	L	H	T	L	E	G	H	A	M	P	I	R	S	L	T	F	S	P	D	S	Q	L	L	V	T	A	S	D	D	G	Y	.	.	.	.	I	K	I	Y	D	V	Q	H	A	N	L	A	G	T	L	S	G	H	A	S	W	V	L	N	V	A	F
Template Known Secondary structure					T	T	S							T	T	T	T										S	S									T	T	S								T	T	S		.	.	.	.						T	T	T											S	S
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		351	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.
Predicted Secondary structure													.																																												.
Query SS confidence													.																																												.
Query Sequence		H	P	S	G	E	W	L	G	F	V	L	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W	M	E	.	G	G	Q	L	W	I	T	E
Query Conservation													.																																												.
Alig confidence													.																				.	.																							.
Template Conservation																																	.	.
Template Sequence		C	P	D	D	T	H	F	V	S	S	S	S	D	K	S	V	K	V	W	D	V	G	T	R	T	C	V	H	T	F	F	.	.	D	H	Q	D	Q	V	W	G	V	K	Y	N	G	N	G	S	K	I	V	S	V	G	D	D	Q	E	I	H	I	Y	D
Template Known Secondary structure			T	T	S	S							T	T	S							T	T	T	T								.	.			S	S									T	T	S	S							T	T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions