 |
Job Description | P31455 | Confidence | 97.94% | Date | Thu Jan 5 11:47:46 GMT 2012 |
Rank | 151 | Aligned Residues | 138 |
% Identity | 14% | Template | c3no2A_ |
PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:uncharacterized protein; |
PDBTitle: crystal structure of a protein of unknown function (baccac_01654) from2 bacteroides caccae at 1.35 a resolution
|
Resolution | 1.35 Å |
|
 |
  |   |
271 | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
|
|
. | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | A | P | P | R | G | V | V | Q | R | R | L | T | F | T | H | H | R | A | . |
. |
. |
. |
Y | P | G | L | V | N | V | P | R | H | W | V | R | C | N | P | Q | G | T | Q | I | A | F | L | M | R | D | D | N | G | I | V | Q | L | W | L | I | S | P | Q | G | G | E | P | R | Q | L | T | H | N | K | T | D | I | Q | S |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | L | V | G | G | S | G | W | N | K | I | A | I | I | N | K | D | T | K | E | I | V | W | E | Y | P | L | E | K | G | W | E | C | N | S | V | A | A | T | K | A | G | E | I | L | F | . |
. |
. |
. |
. |
. |
S | Y | S | K | G | A | K | X | I | T | R | D | G | R | E | L | W | N | I | A | A | P | A | G | C | E | X | Q |
Template Known Secondary structure |   |
 |  |  |  |
| T | T |
| S |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |
|
| T | T |
|
|
|
|  |  |  |  |
| T | T | S |
|  |  |  | . | . | . | . | . | . |  |
| B | S |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |
|
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
  |   |
347 | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | |
. | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | |
|
|
|
. | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | |
. | . | . | . | . | . | . | 410 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |  |  |
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | F | N | W | H | P | S | G | E | W | L | G | F | V | L | . |
D | N | R | I | A | C | A | H | A | Q | S | G | E | V | E | Y | L | T | E | H | H | A | N | S | . |
. |
. |
. |
P | S | A | D | A | V | V | F | S | P | D | G | Q | W | L | A | W | . |
M | E | G | G | Q | L | W | I | T | E | T | D |
Query Conservation |   |
  |   |
|   |
|
|
|
|   |   |
|
|   |   |
| . |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|
|   | . |   |   |   |
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
T | A | R | I | L | P | D | G | N | A | L | V | A | W | C | G | H | P | S | T | I | L | E | V | N | X | K | G | E | V | L | S | K | T | E | F | E | T | G | I | E | R | P | H | A | Q | F | R | Q | I | N | K | N | K | K | G | N | Y | L | V | P | L | F | A | T | S | E | V | R | E | I | A | P | N |
Template Known Secondary structure |   |
 |  |  |  |
| T | T | S |
|  |  |  |  |  |  | S | T | T |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |
|
| S |
| S | S | G | G | G | S |
| S |
|
|  |  |
| T | T | S |
|  |  |  |  |  | T | T | T | T |  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|