Job Description P31455 Confidence 99.36% Date Thu Jan 5 11:47:46 GMT 2012 Rank 116 Aligned Residues 325 % Identity 10% Template c3iumA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl endopeptidase; PDBTitle: appep_wtx opened state Resolution 2.25 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	.	.	.	.	.	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D	F	H
Query Conservation																																							.	.	.	.	.
Alig confidence																				.	.	.																	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.																																																			.	.	.	.	.	.	.	.	.
Template Sequence		F	R	E	G	R	Y	H	Y	F	F	K	N	D	G	L	Q	N	Q	.	.	.	N	V	L	W	R	Q	Q	E	G	K	P	A	E	V	F	L	D	P	N	T	L	S	P	D	G	T	T	A	L	D	Q	L	S	F	S	R	D	G	R	I	L	A	Y	S	L	S	L	A	G	S	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T									S	S		S	S	.	.	.								T	T	S												S	T	T	S											T	T	S	S									T	T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.
Predicted Secondary structure																																																					.	.	.	.																							.	.
Query SS confidence																																																					.	.	.	.																							.	.
Query Sequence		H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	.	.	.	.	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	.	.	P
Query Conservation																																																					.	.	.	.																							.	.
Alig confidence		.	.	.	.	.	.	.	.																																												.	.	.	.																							.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	W	R	E	I	H	L	X	D	V	E	S	K	Q	P	L	E	T	P	L	K	D	V	K	F	S	G	I	S	W	L	G	N	E	G	F	F	Y	S	S	Y	D	K	P	T	D	Q	H	K	V	Y	F	H	R	L	G	T	A	Q	E	D	D	R	L	V	F	G	A	I	P	A	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	S									T	T	T	T												S							T	T	T							S	S													T	T	S		G	G	G						S		S	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		H	H	R	Y	V	G	A	T	V	T	E	D	D	R	F	L	L	I	S	A	A	N	S	T	S	G	N	R	L	Y	V	K	D	L	S	Q	E	N	A	P	L	L	T	V	Q	G	D	L	D	A	D	V	S	L	V	D	N	K	G	S	T	L	Y	L	L	T	N	R	D	A	P	N	R	R	L	.	.	.	.	.
Template Known Secondary structure				S								T	T	S									S	S	S	S									T	T	S	T	T									S	S	S	S									T	T								T	T		T	T				.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	V	D	A	A	N	P	G	P	A	H	W	R	D	L	I	P	E	R	Q	Q	V	L	T	V	H	S	G	S	G	Y	L	F	A	.	E	Y	X	V	D	A	T	A	R	V	E	Q	F	D	Y	E	G	K	R	V	R	E	V	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S			G	G	G									S	S								T	T					.					T	T									T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
																					305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.						.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.					.	.	.	390	.	.	.		.	.	.	.	.	.	400
Predicted Secondary structure																										.	.	.	.	.																								.	.	.	.								.
Query SS confidence																										.	.	.	.	.																								.	.	.	.								.
Query Sequence		N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	D	N	.	.	.	.	.	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	.	.	.	.	S	A	D	A	V	V	F	.	S	P	D	G	Q	W	L
Query Conservation																										.	.	.	.	.																								.	.	.	.								.
Alig confidence																										.	.	.	.	.																								.	.	.	.								.
Template Conservation
Template Sequence		P	G	L	G	S	V	S	G	F	N	G	K	H	D	D	P	A	L	Y	F	G	F	E	N	Y	A	Q	P	P	T	L	Y	R	F	E	P	K	S	G	A	I	S	L	Y	R	A	S	A	A	P	F	K	P	E	D	Y	V	S	E	Q	R	F	Y	Q	S	K	D	G	T	R	V
Template Known Secondary structure		S	S	S	S									T	T		S	S								T	T										T	T	T											S	S			G	G	G											T	T	S
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions