Job Description P31455 Confidence 99.80% Date Thu Jan 5 11:47:46 GMT 2012 Rank 57 Aligned Residues 320 % Identity 14% Template c3i2nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:wd repeat-containing protein 92; PDBTitle: crystal structure of wd40 repeats protein wdr92 Resolution 1.95 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		D	R	A	M	K	Q	I	T	F	A	P	R	N	H	L	L	T	N	T	N	T	W	T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	.	.	.	H	P	K	S	E
Query Conservation																																																																										.	.	.
Alig confidence																																						.	.	.	.	.																																.	.	.
Template Conservation																																						.	.	.	.	.
Template Sequence		E	K	P	Q	I	I	A	H	I	Q	K	G	F	N	Y	T	V	F	D	C	K	W	V	P	C	S	A	K	F	V	T	M	G	N	R	G	.	.	.	.	.	T	G	V	I	Q	L	Y	E	I	Q	H	G	D	L	K	L	L	R	E	I	E	K	A	K	P	I	K	C	G	T	F	G	A	T	S	L	Q	Q	R
Template Known Secondary structure															S	S									T	T	S	S										.	.	.	.	.											S	S	S										S	S								T	T			T	T	T
Template Predicted Secondary structure																																						.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A
Query Conservation
Alig confidence					.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	A	.	T	G	D	F	G	G	N	L	H	I	W	N	L	E	A	P	E	M	P	V	Y	S	V	K	G	H	K	E	I	I	N	A	I	D	G	I	G	G	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	E	G	A	P	E	I	V	T	G	S	R	D	G	T	V	K	V	W	D	P	R
Template Known Secondary structure					.				T	T	S							T	T	S		S	S		S							S	S									S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.			.										T	T	S							T	T
Template Predicted Secondary structure					.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.														.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	.	.	.	.	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		Q	K	D	D	P	V	A	N	M	E	P	V	Q	G	E	N	K	R	D	C	W	T	V	A	F	G	N	A	Y	N	Q	E	E	R	V	V	C	A	G	Y	D	N	G	D	I	K	L	F	D	L	R	N	M	A	L	R	W	E	T	N	I	K	N	G	V	C	S	L	E	F	D	R	K	D	I	S	M	N	K	L
Template Known Secondary structure		S		S	S		S							T	T	S																.										T	T	S							T	T	T	T									S	S								S		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.																											.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.																											.
Template Sequence		V	A	T	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	K	F	H	V	F	D	M	R	T	Q	H	P	T	K	G	F	A	S	V	S	.	.	.	.	.	E	K	A	H	K	S	T	V	W	Q	V	R	H	L	P	Q	N	R	E	L	F	L	T	A	G	G	.	A	G	G
Template Known Secondary structure						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T												T	T	T							.	.	.	.	.					S	S									T	T										T	.	T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.																											.
Template SS confidence
		228	.	230	.	.																			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.						.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.
		322	.	.	.	.	.	.	.																330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.							.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.							.
Query Sequence		V	Q	L	W	L	I	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	.	W	L	G	F	V	L	.	D	N	R	I	A	C	A	H	A	Q
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.							.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.							.
Template Conservation
Template Sequence		L	H	L	W	K	Y	E	Y	P	I	Q	R	K	D	S	E	G	I	E	M	G	V	A	G	S	V	S	L	L	Q	N	V	T	L	S	T	Q	P	I	S	S	L	D	W	S	P	D	K	R	G	L	C	V	C	S	S	F	D	Q	T	V	R	V	L	I	V	T
Template Known Secondary structure											S					T	T	S																			S	S									S	S	S	T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions