Job Description P31455 Confidence 98.16% Date Thu Jan 5 11:47:46 GMT 2012 Rank 148 Aligned Residues 299 % Identity 10% Template c3hxjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyrrolo-quinoline quinone; PDBTitle: crystal structure of pyrrolo-quinoline quinone (pqq_dh) from2 methanococcus maripaludis, northeast structural genomics consortium3 target mrr86 Resolution 2.00 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	L	L	T	N	T	N	T	W	T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W
Query Conservation
Alig confidence																	.	.										.	.	.	.	.	.						.					.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.										.	.	.	.	.	.						.					.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	N	S	I	D	S	S	P	I	L	A	K	N	G	T	.	.	I	Y	L	G	S	S	N	K	N	.	.	.	.	.	.	L	Y	A	I	N	.	T	D	G	S	.	V	K	W	F	F	K	S	G	E	I	I	E	C	R	P	S	I	G	K	D	G	T	I	Y	F	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T	S		.	.				S	S	T	T	T	T	.	.	.	.	.	.	T					.	T	T	S		.				S	S		G	G	G									T	T	T	T					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.										.	.	.	.	.	.						.					.																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.							.	.	.	.	.		.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	D	K	V	Y	A	I	N	P	D	G	T	E	K	W	R	F	D	T	S	D	.	.	.	.	.	.	.	F	T	I	F	E	D	I	L	Y	V	T	S	X	D	G	H	L	Y	A	I	N	T	D	G	T	E	K	W	R	F	K	T	K	K	A	I	Y	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	S	S										G	G	G	G	G	G	S					.	.	.	.	.	.	.					T	T							T	T	S							T	T	S									S	S				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template SS confidence
															76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.																				.	.
Template Conservation									.	.	.	.	.	.	.	.																				.	.
Template Sequence		T	P	I	V	S	E	D	.	.	.	.	.	.	.	.	G	T	I	Y	V	G	S	N	D	N	Y	L	Y	A	I	N	P	D	G	.	.	T	E	K	W	R	F	K	T	N	D	A	I	T	S	A	A	S	I	G	K	D	G	T	I	Y	F	G	S	D	K	V	Y	A	I	N	P	D	G	T	E	K	W	N	F
Template Known Secondary structure							T	T	.	.	.	.	.	.	.	.	S							T	T	S							T	T	S	.	.									S	S				S						T	T							S	S	S						T	T	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		141	.	.	.	.	.	.									.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Sequence		Y	A	G	Y	W	T	V	T	R	P	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	D	G	T	I	Y	V	T	S	L	D	G	.	.	.	.	H	L	Y	A	I	N	P	D	G	T	E	K	W	R	F	K	T
Template Known Secondary structure				S	S				S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S							T	T	T	.	.	.	.							T	T	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.																																			.	.	.	.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W	M	E	G	G	Q	L	W	I	T	E
Query Conservation
Alig confidence																															.						.	.
Template Conservation																															.						.	.
Template Sequence		G	K	R	I	E	S	S	P	V	I	G	N	T	D	T	I	Y	F	G	S	Y	D	G	H	L	Y	A	I	N	.	P	D	G	T	E	.	.	K	W	N	F	E	T	G	S	W	I	I	A	T	P	V	I	D	E	N	G	T	I	Y	F	G	T	R	N	G	K	F	Y	A	L	F
Template Known Secondary structure		S	S				S						T	T	S							T	T								.	T	T	S			.	.							S	S				S						T	T								T	T	S
Template Predicted Secondary structure																															.						.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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