Job Description P31455 Confidence 98.10% Date Thu Jan 5 11:47:46 GMT 2012 Rank 149 Aligned Residues 343 % Identity 9% Template c3hrpA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of structural genomics protein of unknown function2 (np_812590.1) from bacteroides thetaiotaomicron vpi-5482 at 1.70 a3 resolution Resolution 1.70 Å

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		30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure						.	.	.	.																																																	.	.
Query SS confidence						.	.	.	.																																																	.	.
Query Sequence		W	T	P	D	.	.	.	.	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	.	.	P	K	S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D
Query Conservation						.	.	.	.																																																	.	.
Alig confidence						.	.	.	.																																					.												.	.
Template Conservation																																														.
Template Sequence		F	X	P	V	E	G	K	L	R	E	K	V	I	V	K	G	S	N	F	G	T	D	K	S	K	V	K	V	Y	F	V	D	E	A	A	E	R	L	S	T	V	I	G	I	.	D	N	N	T	L	Y	C	L	A	P	R	Q	L	P	G	G	N	R	I	K	V	I	V	D	G	K	E	V	T	T	D	G	T	F	K
Template Known Secondary structure					S				T	T												S		G	G	G								S	S											.		T	T								S			S										T	T						S	S
Template Predicted Secondary structure																																														.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q
Query Conservation
Alig confidence																											.	.	.
Template Conservation																											.	.	.
Template Sequence		Y	E	Q	A	Q	N	V	S	T	I	S	G	S	A	S	K	D	G	N	D	D	G	D	L	A	.	.	.	S	A	K	F	K	Y	X	W	G	I	A	A	V	G	N	N	T	V	L	A	Y	Q	R	D	D	P	R	V	R	L	I	S	V	D	D	N	K	V	T	T	V	H	P	G	F	K	G	G	K	P	A	V
Template Known Secondary structure															T	T			S				B	S	T	T	.	.	.	T													S	T	T							T	T	T	T							T	T	T	T								T			B		B
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	.	.	.	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G
Query Conservation																																		.	.	.
Alig confidence								.	.	.	.	.	.																					.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	D	K	Q	R	.	.	.	.	.	.	V	Y	S	I	G	W	E	G	T	H	T	V	Y	V	Y	X	K	A	S	G	W	A	P	T	R	I	G	Q	L	G	S	T	F	S	G	K	I	G	A	V	A	L	D	E	T	E	E	W	L	Y	F	V	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	S	S		.	.	.	.	.	.					B	S	S	T	T								G	G	G	T	T										T	T	S		S				B					T	T	S	S							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.							.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.	.	.	.	.	.																																						.	.	.																				.	.											.	.	.
Template Conservation		.	.	.	.	.	.																																						.	.	.																				.	.
Template Sequence		.	.	.	.	.	.	N	K	N	F	G	R	F	N	V	K	T	Q	E	V	T	L	I	K	Q	L	E	L	S	G	S	L	G	T	N	P	G	P	Y	L	I	Y	Y	.	.	.	F	V	D	S	N	F	Y	X	S	D	Q	N	L	S	S	V	Y	K	I	.	.	T	P	D	G	E	C	E	W	F	C	G	S	A
Template Known Secondary structure		.	.	.	.	.	.	T								T	T	T													S					S	S								.	.	.	T	T	T	T							T	T	T	T						.	.		T	T										T
Template Predicted Secondary structure		.	.	.	.	.	.																																						.	.	.																				.	.
Template SS confidence
								260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.
												338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																									.	.																																					.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																									.	.																																					.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.																									.	.																																					.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																									.	.																												.	.	.	.	.	.	.			.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.
Template Sequence		T	Q	K	T	V	Q	D	G	L	R	E	E	A	L	F	A	Q	P	N	G	X	T	V	D	E	D	G	N	F	Y	I	V	D	G	F	K	G	Y	C	L	R	K	L	D	I	L	D	G	Y	V	S	T	V	A	G	Q	V	D	V	A	S	Q	I	.	.	.	.	.	.	.	D	G	T	P	L	E	A	T	F	N
Template Known Secondary structure		T			S		B				G	G	G		B		S	S								T	T								T	T	T	T								T	T	T	T									T	T		B	S			.	.	.	.	.	.	.		B	S	T	T	T			B	S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.								.	.	.	.	.	.	.	.	400	.
				398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Q	W	L	A	W	M	E	G	G	Q	L	W	I	T	E	T	D
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		Y	P	Y	D	I	C	Y	D	G	E	G	G	Y	W	I	A	E	A	W
Template Known Secondary structure		S								S	S	S							S	T
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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