Job Description P31455 Confidence 99.77% Date Thu Jan 5 11:47:46 GMT 2012 Rank 66 Aligned Residues 331 % Identity 11% Template c3hfqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein lp_2219; PDBTitle: crystal structure of the lp_2219 protein from lactobacillus2 plantarum. northeast structural genomics consortium target3 lpr118. Resolution 1.96 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		I	L	F	G	T	Y	T	K	K	T	S	Q	G	I	Y	Q	G	T	L	D	T	T	A	K	T	L	T	N	D	G	L	L	A	A	T	Q	N	P	T	Y	L	A	L	S	A	K	D	C	L	Y	S	.	V	D	K	E	D	D	E	G	G	I	A	A	W	Q	I	D	G	Q	T	A	H	K	L	N	T	V	V	A
Template Known Secondary structure									S	S	S											T	T	T	T												S									T	T						.					T	T											T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	.	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C
Query Conservation																																							.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																																						.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.
Template Sequence		P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	P	P	A	Y	V	A	V	D	E	A	R	Q	L	V	Y	S	A	N	Y	H	K	G	T	A	E	V	X	K	I	A	A	D	G	A	L	T	L	T	D	T	V	Q	H	S	G	H	G	P	R	P	E	Q	D	G	S	H	.	.	.	.	I
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				S						T	T	T	T							T	T	T	T									T	T	S															S	S	T	T		S	S			.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.
Template SS confidence
		84																	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R
Query Conservation
Alig confidence																																												.	.	.	.
Template Conservation																																												.	.	.	.
Template Sequence		H	Y	T	D	L	T	P	D	N	R	L	A	V	I	D	L	G	S	D	K	V	Y	V	Y	N	V	S	D	A	G	Q	L	S	E	Q	S	V	L	T	X	E	A	.	.	.	.	G	F	G	P	R	H	L	V	F	S	P	D	G	Q	Y	A	F	L	A	G	E	L	S	S	Q	I	A	S	L	K	Y	D	T	Q
Template Known Secondary structure								T	T	S							T	T	T	T									T	T	S												T	.	.	.	.	T										T	T	S	S							T	T	T	T									T	T
Template Predicted Secondary structure																																												.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	A	F	T	Q	L	G	I	V	K	T	I	P	A	D	Y	T	A	H	N	G	A	A	A	I	R	L	S	H	D	G	H	F	L	Y	V	S	N	R	G	Y	N	T	L	A	V	F	A	V	T	A	D	G	H	L	T	L	I	Q	Q	I	S	T	E	G	D	F	P	R	D	F	D	L	D	P	T	E	A	F
Template Known Secondary structure		T	T										S	S		T	T			S											T	T	S									T	T	T									T	T	S											S	S	S									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		357	.	.	360	.			.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure							.	.								.	.
Query SS confidence							.	.								.	.
Query Sequence		L	G	F	V	L	.	.	D	N	R	I	A	C	A	.	.	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S
Query Conservation							.	.								.	.
Alig confidence							.	.								.	.																					.
Template Conservation																																						.
Template Sequence		V	V	V	V	N	Q	N	T	D	N	A	T	L	Y	A	R	D	L	T	S	G	K	L	S	L	L	Q	K	D	V	T	V	P	E	G	V	.	C	V	R	F	L
Template Known Secondary structure							T	T	T	T									T	T	T													T	T			.
Template Predicted Secondary structure																																						.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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