Phyre 2 alignment of P31455 with c3frxB

Job Description P31455
Confidence 99.77% Date Thu Jan 5 11:47:46 GMT 2012

Rank 72 Aligned Residues 291

% Identity 13% Template c3frxB_

PDB info PDB header:signaling protein Chain: B: PDB Molecule:guanine nucleotide-binding protein subunit beta- PDBTitle: crystal structure of the yeast orthologue of rack1, asc1.

Resolution 2.13 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	V	L	R	G	T	L	E	G	H	N	G	W	V	T	S	L	A	T	S	A	G	Q	P	N	L	L	L	S	A	S	R	D	K	T	L	I	S	W	K	L	T	G	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	F	G	V	P	V	R	S	F	K	G	H	S	H	I	V	Q	D	C	T
Template Known Secondary structure										S	S									S	S		T	T							T	T	S											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T													S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.

	143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V
Query Conservation
Alig confidence																																																.	.	.	.	.	.																				.	.
Template Conservation																																																.	.	.	.	.	.																				.	.
Template Sequence	L	T	A	D	G	A	Y	A	L	S	A	S	W	D	K	T	L	R	L	W	D	V	A	T	G	E	T	Y	Q	R	F	V	G	H	K	S	D	V	X	S	V	D	I	D	K	K	A	.	.	.	.	.	.	S	X	I	I	S	G	S	R	D	K	T	I	K	V	W	T	I	K	G	.	.	Q	C	L	A	T	L
Template Known Secondary structure			T	T	S	S							T	T	S							T	T	T	T										S	S									T	T	S	.	.	.	.	.	.								T	T	S							T	T	S	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.																				.	.
Template SS confidence
	73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.

	223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	.	.	.	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R
Query Conservation																								.	.	.
Alig confidence																								.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	L	G	H	N	D	W	V	S	Q	V	R	V	V	P	N	S	V	T	I	I	S	A	G	N	D	K	X	V	K	A	W	N	L	N	Q	F	Q	I	E	A	D	F	I	G	H	N	S	N	I	N	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S																			T	T	S							T	T	T	T											S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T
Query Conservation
Alig confidence	.	.	.																		.	.	.	.																	.
Template Conservation	.	.	.																		.	.	.	.																	.
Template Sequence	.	.	.	T	A	S	P	D	G	T	L	I	A	S	A	G	K	D	G	E	.	.	.	.	I	X	L	W	N	L	A	A	K	K	A	X	Y	T	L	S	.	A	Q	D	E	V	F	S	L	A	F	S	P	N	R	Y	W	L	A	A	A	T	A	T	G	I	K	V	F	S	L	D	P	Q	Y	L	V	D	D	L
Template Known Secondary structure	.	.	.				T	T	S	S							T	T			.	.	.	.						T	T	T	T								.			S									S	S	S	S							T	T								T	T
Template Predicted Secondary structure	.	.	.																		.	.	.	.																	.
Template SS confidence
				203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

	380							.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.
Predicted Secondary structure		.	.	.	.	.	.																									.
Query SS confidence		.	.	.	.	.	.																									.
Query Sequence	E	.	.	.	.	.	.	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W	M	E	.	G	G	Q	L	W	I	T	E
Query Conservation		.	.	.	.	.	.																									.
Alig confidence		.	.	.	.	.	.																									.
Template Conservation
Template Sequence	R	P	E	F	A	G	Y	S	K	A	A	E	P	H	A	V	S	L	A	W	S	A	D	G	Q	T	L	F	A	G	Y	T	D	N	V	I	R	V	W	Q
Template Known Secondary structure					T	T			T	T	T											T	T	S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
	275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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