Job Description P31455 Confidence 99.87% Date Thu Jan 5 11:47:46 GMT 2012 Rank 31 Aligned Residues 322 % Identity 11% Template c3fgbB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein q89zh8_bactn; PDBTitle: crystal structure of the q89zh8_bactn protein from2 bacteroides thetaiotaomicron. northeast structural3 genomics consortium target btr289b. Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		V	L	Y	Q	D	R	A	M	K	Q	I	T	F	.	A	P	R	N	H	L	L	T	N	T	N	T	W	T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K
Query Conservation															.
Alig confidence															.																																.																					.
Template Conservation																																															.																					.
Template Sequence		S	F	R	F	N	E	E	N	G	T	A	T	A	L	S	E	A	E	V	E	N	P	S	Y	L	V	P	S	A	D	G	K	F	I	Y	A	V	S	E	F	S	N	E	Q	A	.	A	A	N	A	F	A	F	N	K	E	E	G	T	F	R	L	L	N	T	Q	.	K	T	G	G	E	D	P	C	Y	I	I	T	N
Template Known Secondary structure							T	T	T												S									S	S	S	S									S	S	T	T		.									T	T	T	T									.			S	S	S
Template Predicted Secondary structure																																															.																					.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	.	D	H	V	M	H	E	L
Query Conservation																																																																										.
Alig confidence																										.	.	.	.	.	.																																											.
Template Conservation																										.	.	.	.	.	.
Template Sequence		G	S	N	V	V	T	A	N	Y	S	G	G	S	I	S	V	F	P	I	D	K	D	G	S	.	.	.	.	.	.	L	L	P	A	S	E	V	V	K	F	K	G	S	G	A	D	K	E	R	Q	E	K	P	H	L	H	C	V	R	I	T	P	D	G	K	Y	L	F	A	D	D	L	G	T	D	Q	I	H	K	F
Template Known Secondary structure		S	S							T	T	T	T							B		T	T	S		.	.	.	.	.	.	B		S												S	S	T	T	T		S	S										T	T	S	S							T	T	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.							.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P
Query Conservation
Alig confidence									.	.																																																																				.	.	.	.
Template Conservation									.	.																																																																				.	.	.	.
Template Sequence		I	V	N	P	N	A	K	.	.	A	D	N	E	D	V	F	L	K	E	G	S	P	A	S	Y	K	V	E	A	G	S	G	P	R	H	L	T	F	A	P	N	G	S	Y	A	Y	L	I	N	E	L	S	G	T	V	I	A	F	E	Y	N	D	G	E	L	K	E	I	Q	T	I	A	A	D	T	V	.	.	.	.
Template Known Secondary structure					T	T			.	.	T	T	S				S													T	T										T	T	S	S							T	T	T										T	T										S		S	S	.	.	.	.
Template Predicted Secondary structure									.	.																																																																				.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	K	G	S	G	D	I	H	I	S	P	D	G	K	F	L	Y	A	S	N	R	L	K	A	D	G	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	S	S								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																						279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																	.																									.	.								.	.
Query SS confidence																	.																									.	.								.	.
Query Sequence		Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	.	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	.	D	N	R	I	A	C	A	.	.	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F
Query Conservation																	.																									.	.								.	.
Alig confidence																	.																									.	.								.	.																			.
Template Conservation																																																																							.
Template Sequence		A	I	F	S	I	H	P	E	N	G	X	L	T	K	V	G	Y	Q	L	T	G	I	H	P	R	N	F	I	I	T	P	N	G	K	Y	L	L	V	A	C	R	D	S	N	V	I	Q	V	Y	E	R	D	T	D	T	G	L	L	T	D	I	R	K	D	I	K	V	D	K	.	P	V	C	I	K	F
Template Known Secondary structure								T	T	T												S	S									T	T	S								T	T	T	T									T	T	T							S						S	S	.
Template Predicted Secondary structure																																																																							.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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