Job Description P31455 Confidence 98.76% Date Thu Jan 5 11:47:46 GMT 2012 Rank 131 Aligned Residues 313 % Identity 10% Template c3dsmA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bacuni_02894; PDBTitle: crystal structure of the surface layer protein bacuni_02894 from2 bacteroides uniformis, northeast structural genomics consortium3 target btr193d. Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	.	.	.	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G
Query Conservation																														.	.	.
Alig confidence																														.	.	.
Template Conservation
Template Sequence		L	F	I	T	N	E	G	N	F	Q	Y	S	N	A	T	L	S	Y	Y	D	P	A	T	C	E	V	E	N	E	V	F	Y	R	A	N	G	F	K	L	G	D	V	A	Q	S	X	V	I	R	D	G	I	G	W	I	V	V	N	N	S	H	V	I	F	A	I	D	I	N	T	F	K	E	V	G	R	I	T	G	F
Template Known Secondary structure										T	T	S			B							T	T	T	T					S							S	S			B	S									T	T							G	G	G	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		T	S	P	R	Y	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	S	D	E	K	A	Y	V	T	Q	I	W	D	Y	R	I	F	I	I	N	P	K	T	Y	E	I	T	G	Y	I	E	C	P	D	X	D	X	E	.	S	G	S	T	E	Q	X	V	Q	Y	G	K
Template Known Secondary structure		S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T							B	S		S							T	T	T	T									T	T			T	T	.	T		B								T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		98	.	100	.	.	.	.																						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	Y	V	N	C	W	S	Y	Q	N	R	I	L	K	I	D	T	E	T	D	K	V	V	D	E	L	T	I	G	I	Q	P	T	S	L	V	X	D	K	Y	N	K	X	W	T	I	T	D	G	G	Y	E	G	S	P	Y	G	Y	E	A	P	S	L	Y	R	I	D	A	E	T	F	T	V	E	K	Q	F	K	F
Template Known Secondary structure									T	T									T	T	T	T									S	S		B							T	T	S						B			B		T	T		S	S		B										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		K	L	G	D	W	P	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	N	G	T	R	D	T	L	Y	W	I	.	.	.	.	N	N	D	I	W	R	X	P	V	E	A	D	R	V	P	V	R	P	F	L	E	F	R	D	T	K	Y	Y	G	L	T	V	N	P	N	N
Template Known Secondary structure			T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S							.	.	.	.	S	S	S						T	T		S	S			S	S		S	B				S	S									T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.																				.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		355	.	.	.	.	360							.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		E	W	L	G	F	V	.	.	.	.	.	.	L	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.										.																.	.	.
Template Conservation																							.																.	.	.
Template Sequence		G	E	V	Y	V	A	D	A	I	D	Y	Q	Q	Q	G	I	V	Y	R	Y	S	.	P	Q	G	K	L	I	D	E	F	Y	V	G	I	I	P	.	.	.	G	A	F	C	W	K	L	E	H	H	H
Template Known Secondary structure										T	T	S	S	S									.	T	T												S		.	.	.
Template Predicted Secondary structure																							.																.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions