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Job DescriptionP31455
Confidence99.82%DateThu Jan 5 11:47:46 GMT 2012
Rank51Aligned Residues334
% Identity10%Templatec3c75J_
PDB info PDB header:oxidoreductaseChain: J: PDB Molecule:methylamine dehydrogenase heavy chain; PDBTitle: paracoccus versutus methylamine dehydrogenase in complex2 with amicyanin
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80.........90..
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Query Sequence  APRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQGAHVGVVTVHPKSEKYVFIHG. . . . .
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Template Sequence  AGEADEPVILEAPAPDARRVYIQDPAHFAA. . ITQQFVIDGSTGRILGMTDGGFLP. . . HPVAAEDGSFFAQASTVFERI
Template Known Secondary structure  SS













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   68.70.........80.........90....... ..100.........110.........120. ........130.........140..
 
   93......100.........110.........120.........130.........140.........150... ......160......
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Query Sequence  . . . . PENPDETWHYDFHHRRGVIVEGGKMSNLDAMDITAPYTPGVLRGGSHVHVFSPNGERVSFT. . YNDHVMHELDPAL
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Template Sequence  ARGKRTDYVEVFDPVTFLPIADIELPDAPR. . . . . . . . . . . . . FLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG
Template Known Secondary structure  T
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   143......150.........160.........170.. .......180.........190.........200.........
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  DLRNVGVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFI
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Template Sequence  KTFDRMLDVPDCYHIF. . . . . . . . . . . . . . . . . . PASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPA
Template Known Secondary structure  T

S..................TTTTSS

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   210.........220..... ....230.........240.........250.........260.........270.
 
   247..250.........260.........270.........280..... ....290.........300.........310....... .
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Query Sequence  VELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTF. . THHRAYPGLVNVPRHWVRCNPQGTQIAFLMRD. . . . . . D
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Template Sequence  . . . . . FSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHK
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TTT
BTTS
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SS
TTTGGGT
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   272.......280.........290.........300.........310.........320.........330.........340......
 
   319320.........330.........340.........350.........360. ........370.........380.........390.....
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Query Sequence  NGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL. . . DNRIACAHAQSGEVEYLTEHHANSPSADAVVFSP
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Template Sequence  AASRFVVVLNAETGERINKIELGHE. IDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQ. . . LGRGPQIITTH
Template Known Secondary structure  S
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   347..350.........360.........370. ........380.........390.........400.........410. ........420..
 
   396
Predicted Secondary structure 
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Query Sequence  D
Query Conservation 
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Template Sequence  D
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   423
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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