Job Description P31455 Confidence 98.18% Date Thu Jan 5 11:47:46 GMT 2012 Rank 147 Aligned Residues 325 % Identity 10% Template c3a9gA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of pqq-dependent sugar dehydrogenase apo-form Resolution 2.39 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.	.
Predicted Secondary structure																																																							.	.																		.	.	.	.
Query SS confidence																																																							.	.																		.	.	.	.
Query Sequence		Q	I	T	F	A	P	R	N	H	L	L	T	N	T	N	T	W	T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	.	.	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	.	.	.	.	S	E	K	Y
Query Conservation																																																							.	.																		.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.																		.	.																		.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.
Template Sequence		K	I	S	E	V	A	S	D	L	E	V	P	W	S	I	A	P	L	G	G	G	R	Y	L	V	T	E	R	.	.	.	.	.	.	.	.	P	G	R	L	V	L	I	S	P	S	G	K	K	L	V	A	S	F	D	V	A	N	V	G	E	A	G	L	L	G	L	A	L	H	P	E	F	P	K	K	S	W	V	Y
Template Known Secondary structure									S		S										T	T							T	.	.	.	.	.	.	.	.	T	T							S	S													S	T	T		S								T	T	T	T	T	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	.	D	P	A	L
Query Conservation																																																																													.
Alig confidence																.	.	.	.	.																																																									.
Template Conservation																.	.	.	.	.
Template Sequence		L	Y	A	S	Y	F	A	E	G	G	H	I	R	N	.	.	.	.	.	R	V	I	R	G	R	L	D	G	S	T	F	K	L	K	E	V	K	T	L	I	D	G	I	P	G	A	Y	I	H	N	G	G	R	I	R	F	G	P	D	G	M	L	Y	I	T	T	G	D	A	A	D	P	R	L	A	Q	D	L	S	S
Template Known Secondary structure									G	G	G					.	.	.	.	.									S	S	S																	S	S										T	T	S									T	T		G	G	G	G	T		T	T
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I
Query Conservation
Alig confidence																	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		L	A	G	K	I	L	R	V	D	E	E	G	R	P	P	.	.	.	.	.	.	.	A	D	N	P	F	P	N	S	P	I	W	S	Y	G	H	R	N	P	Q	G	I	D	W	H	R	A	S	G	V	M	V	A	T	E	H	G	P	V	G	H	D	E	V	N	I	I	L	K	G	G	N	Y	G	W	P	L	A	T
Template Known Secondary structure			S	S							T	T	S				.	.	.	.	.	.	.	T	T	S	S	S	T	T									S									T	T	T										S	S	S									T	T		B			T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.								.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	A	G	R	G	E	F	V	D	P	V	I	D	T	G	S	E	T	W	A	P	S	G	A	S	F	V	H	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	P	G	L	R	G	W	L	L	I	A	C	L	R	G	S	M	L	A	A	V	N	F
Template Known Secondary structure		S					T	T	S				S				T	T													S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		G	G	G	T	T							T	T	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.																										.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		327	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure						.																																.
Query SS confidence						.																																.
Query Sequence		I	S	P	Q	.	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A
Query Conservation						.																																.
Alig confidence						.																																.
Template Conservation
Template Sequence		G	D	N	M	E	V	R	K	I	S	T	F	F	K	N	V	F	G	R	L	R	D	V	V	I	D	D	D	G	G	I	L	I	S	T	S	N	R	D	G	R	G	S	L	R	A	G	D	D	K	I	L	K	I	V	S	E	Q	H
Template Known Secondary structure			G	G	G										T	T	T	S										T	T	S								T	T	S	S	S	S				T	T		S								T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions