Job Description P31455 Confidence 92.30% Date Thu Jan 5 11:47:46 GMT 2012 Rank 166 Aligned Residues 270 % Identity 10% Template c2z2pA_ PDB info PDB header:lyase/antibiotic Chain: A: PDB Molecule:virginiamycin b lyase; PDBTitle: crystal structure of catalytically inactive h270a virginiamycin b2 lyase from staphylococcus aureus with quinupristin Resolution 2.80 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.
Template Sequence		L	N	L	T	N	Q	D	T	G	P	Y	G	I	T	V	S	D	K	G	K	V	W	I	T	Q	H	K	A	N	M	I	S	C	I	N	L	D	G	K	I	T	E	Y	E	L	P	N	K	G	A	K	V	M	C	L	T	I	S	S	D	G	E	.	.	.	.	.	.	.	V	W	F	T	E	N	A	A	N	K	I
Template Known Secondary structure					S			S										S	S	S							T	T	T	T							T	T	S								S	S	S											T	T	S		.	.	.	.	.	.	.						T	T	T	T
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.								70	.	.	.	.	.	.	.	.	.	80
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	.	.	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T
Query Conservation																																							.	.
Alig confidence																																							.	.
Template Conservation
Template Sequence		G	R	I	T	K	K	G	I	I	K	E	Y	T	L	P	N	P	D	S	A	P	Y	G	I	T	E	G	P	N	G	D	I	W	F	T	E	M	N	G	N	R	I	G	R	I	T	D	D	G	K	I	R	E	Y	E	L	P	N	K	G	S	Y	P	S	F	I	T	L	G	S	D	N	A	L	W	F	T	E	N	Q
Template Known Secondary structure						T	T	S								S	S	T	T										T	T	S							T	T	T	T							S	S			B						S	S	T	T										T	T	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.									.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.
Query Sequence		H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	.	.	.	.	.	.	.	.	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G
Query Conservation																																		.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	N	A	I	G	R	I	T	E	S	G	D	I	T	E	F	K	I	P	T	P	A	S	G	P	V	G	I	T	K	G	N	D	D	A	L	W	F	V	E	I	I	G	N	K	I	G	R	I	T	T	S	G	E	I	T	E	F	K	I	P	T	P	N	A	R	P	H	A	I	T	A	G	A	G	I	D	L	W	F
Template Known Secondary structure		T	T							T	T									S	S	T	T										T	T	S	S						T	T	T	T							S	S									S	S	T	T										S	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		359	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.
Predicted Secondary structure					.																																										.
Query SS confidence					.																																										.
Query Sequence		F	V	L	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W	.	M	E	G	G	Q	L	W
Query Conservation					.																																										.
Alig confidence					.													.	.																			.	.								.
Template Conservation																		.	.																			.	.
Template Sequence		T	E	W	G	A	N	K	I	G	R	L	T	S	N	N	I	.	.	I	E	E	Y	P	I	Q	I	K	S	A	E	P	A	G	I	C	F	.	.	D	G	E	T	I	W	F	A	M	E	C	D	K	I	G
Template Known Secondary structure				T	T	T	T							G	G	G		.	.								S	T	T									.	.		S	S							T	T	T
Template Predicted Secondary structure																		.	.																			.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions