Job Description P31455 Confidence 95.68% Date Thu Jan 5 11:47:46 GMT 2012 Rank 158 Aligned Residues 275 % Identity 8% Template c2xbgA_ PDB info PDB header:photosynthesis Chain: A: PDB Molecule:ycf48-like protein; PDBTitle: crystal structure of ycf48 from thermosynechococcus2 elongatus Resolution 1.50 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N
Query Conservation
Alig confidence																																																										.	.	.	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		T	A	T	I	L	D	M	S	F	I	D	R	H	H	G	W	L	V	G	V	N	A	T	L	M	E	T	R	D	G	G	Q	T	W	E	P	R	T	L	V	L	D	H	S	D	Y	R	F	N	S	V	S	F	Q	G	N	.	.	.	.	.	E	G	W	I	V	G	E	P	P	I	M	L	H	T	T	D	G	G	Q
Template Known Secondary structure		S	S								S	S	S	S							T	T	T						S	S	T	T	S	S									S													T	T	.	.	.	.	.								T	T						S	S	T	T	S
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	W	S	Q	I	P	L	D	P	K	L	P	G	S	P	R	L	I	K	A	L	G	N	G	S	A	E	M	I	T	N	V	G	A	I	Y	R	T	K	D	S	G	K	N	W	Q	A	L	V	Q	E	A	I	G	V	M	R	N	L	N	R	S	P	S	G	E	Y	V	A	V	S	S	R	G	S	F	Y	S	T	W
Template Known Secondary structure		S								T	T		S	S										T	T							T	T							S	S	T	T	S	S							S												T	T	S							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.													.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	.	.	.	.	.	.	.	.	.	.	.	.	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	D
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	P	G	Q	T	A	W	E	P	H	N	R	T	T	S	R	R	L	H	N	M	G	F	T	P	D	G	R	L	W	M	I	V	N	G	G	K	I	A	F	S	D	P	D	N	S	E	N	W	G	E	L	L	S	P	L	R	R	N	S	V	G	F	L	D	L	A	Y	R	T	P	N	E	V	W	L	A	G	G	A
Template Known Secondary structure			T	T		S	S								S	S	S									T	T	S							T	T	T							T	T									B		T	T	S	S			S								S	S	S	S							S	T
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W	M	E	G	G	Q	L	W	I	T	E	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	L	L	C	S	Q	D	G	G	Q	T	W	Q	Q	D	V	D	V	K	K	V	P	S	N	F	Y	K	I	L	F	F	S	P	D	Q	G	F	I	L	G	Q	K	G	I	L	L	R	Y	V	T	D
Template Known Secondary structure		T						S	S	T	T	S	S					G	G	G	T	T	S	S	S										T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions