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Job DescriptionP31455
Confidence97.04%DateThu Jan 5 11:47:46 GMT 2012
Rank155Aligned Residues264
% Identity11%Templatec2qc5A_
PDB info PDB header:lyaseChain: A: PDB Molecule:streptogramin b lactonase; PDBTitle: streptogramin b lyase structure
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180.........190.........200.........210....
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Query Sequence  RGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEIN
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Template Sequence  DSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGD. . . . . . . IWFTENGANKIGKLSKK
Template Known Secondary structure  T


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   14.....20.........30.........40.........50.........60......... 70.........80......
 
   215....220.........230.........240..... ....250.........260.........270.........280.........290..
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Query Sequence  RAYEEGWVGNHALAFIGDTLSPKGEKVPELF. . IVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYP
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Template Sequence  GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGR
Template Known Secondary structure  S

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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   293......300.........310.........320... ......330.........340.........350.........360. ..
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Query Sequence  GLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQ. . . . . . . . LWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL. DN
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Template Sequence  ITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGAN
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   364.....370.........380.........390.........400........
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Query Sequence  RIACAHAQSGEVEYLTEHHANSPSADAVVFSPDGQWLAWMEGGQL
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Template Sequence  QIGRITNDNTIQEYQ. . LQTENAEPHGITFGKDGS. VWFALKCKI
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   247..250.........260. ........270......... 280........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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