Job Description P31455 Confidence 99.73% Date Thu Jan 5 11:47:46 GMT 2012 Rank 83 Aligned Residues 311 % Identity 12% Template c2ovqB_ PDB info PDB header:transcription/cell cycle Chain: B: PDB Molecule:f-box/wd repeat protein 7; PDBTitle: structure of the skp1-fbw7-cyclinedegc complex Resolution 2.60 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P
Query Conservation
Alig confidence															.										.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation															.										.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		K	V	L	K	G	H	D	D	H	V	I	T	C	.	L	Q	F	C	G	N	R	I	V	.	S	G	S	D	D	N	T	L	K	V	W	S	A	V	T	G	K	C	L	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	G	H	T	G	G	V	W	S	S	Q	M	.	.
Template Known Secondary structure							S	T	T	S					.					T	T				.				T	T	S							T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S								.	.
Template Predicted Secondary structure															.										.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		2374	.	.	.	.	.	2380	.	.	.	.	.	.		.	.	.	2390	.	.	.	.	.		.	.	.	.	2400	.	.	.	.	.	.	.	.	.	2410	.	.	.	.	.	.																					.	.	.	2420	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.
Template Sequence		R	D	N	I	I	I	S	G	S	T	D	R	T	L	K	V	W	N	A	E	T	G	E	C	I	H	T	L	Y	G	H	T	S	T	V	R	C	M	H	L	H	E	.	.	.	.	.	.	.	.	K	R	V	V	S	G	S	R	D	A	T	L	R	V	W	D	I	E	T	G	Q	C	L	H	V	L	M	G	H	V
Template Known Secondary structure			T	T							T	T	S							T	T	T											S	S									T	.	.	.	.	.	.	.	.	T							T	T	S							T	T	T											S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Template SS confidence
		2430	.	.	.	.	.	.	.	.	.	2440	.	.	.	.	.	.	.	.	.	2450	.	.	.	.	.	.	.	.	.	2460	.	.	.	.	.	.	.	.	.	2470	.									.	.	.	.	.	.	.	.	2480	.	.	.	.	.	.	.	.	.	2490	.	.	.	.	.	.	.	.	.	2500	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.								.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.
Query Sequence		A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	.	.	.	.	.	.	.	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P
Query Conservation																																																				.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	V	R	C	V	Q	Y	D	G	R	R	V	V	S	G	A	Y	D	F	M	V	K	V	W	D	P	E	T	E	T	C	L	H	T	L	Q	G	H	T	N	R	V	Y	S	L	Q	F	D	G	I	H	V	V	S	G	S	L	D	T	S	I	R	V	W	D	V	E	T	G	N	C	I	H	T	L	T	G	H	Q
Template Known Secondary structure		S									S	S							T	T	S							G	G	G	T										S	S									S	S							T	T	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		2502	.	.	.	.	.	.	.	2510	.	.	.	.	.	.	.	.	.	2520	.	.	.	.	.	.	.	.	.	2530	.	.	.	.	.	.	.	.	.	2540	.	.	.	.	.	.	.	.	.	2550	.	.	.	.	.	.	.	.	.	2560	.	.	.	.	.	.	.	.	.	2570	.	.	.	.	.	.	.	.	.	2580	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340				.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																																												.	.	.																						.
Query SS confidence																																												.	.	.																						.
Query Sequence		R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	.	.	.	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	D	N	R	I	A	C	A	H	A	Q	S	G	E
Query Conservation																																												.	.	.																						.
Alig confidence																							.	.	.	.																		.	.	.											.	.										.
Template Conservation																							.	.	.	.																															.	.
Template Sequence		S	L	T	S	G	M	E	L	K	D	N	I	L	V	S	G	N	A	D	S	T	.	.	.	.	V	K	I	W	D	I	K	T	G	Q	C	L	Q	T	L	Q	G	P	N	K	H	Q	S	A	V	T	C	L	Q	F	.	.	N	K	N	F	V	I	T	S	S	D	D	G	T	V	K	L	W	D	L	K	T	G	E
Template Known Secondary structure		S									T	T							T	T	S		.	.	.	.						T	T	T									S	T	T			S	S								.	.		S	S							T	T	S							T	T	T
Template Predicted Secondary structure																							.	.	.	.																															.	.
Template SS confidence
		2582	.	.	.	.	.	.	.	2590	.	.	.	.	.	.	.	.	.	2600	.	.					.	.	.	.	.	.	.	2610	.	.	.	.	.	.	.	.	.	2620	.	.	.	.	.	.	.	.	.	2630	.	.			.	.	.	.	.	.	.	2640	.	.	.	.	.	.	.	.	.	2650	.	.	.	.	.
		375	.	.	.	.	380	.				.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.						.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure									.	.	.																								.	.	.	.	.
Query SS confidence									.	.	.																								.	.	.	.	.
Query Sequence		V	E	Y	L	T	E	H	.	.	.	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W	M	E	.	.	.	.	.	G	G	Q	L	W	I	T	E	T	D
Query Conservation									.	.	.																								.	.	.	.	.
Alig confidence									.	.	.																								.	.	.	.	.
Template Conservation
Template Sequence		F	I	R	N	L	V	T	L	E	S	G	G	S	G	G	V	V	W	R	I	R	A	S	N	T	K	L	V	C	A	V	G	S	R	N	G	T	E	E	T	K	L	L	V	L	D	F	D
Template Known Secondary structure										T	T	G	G	G	T										S	S									S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		2656	.	.	.	2660	.	.	.	.	.	.	.	.	.	2670	.	.	.	.	.	.	.	.	.	2680	.	.	.	.	.	.	.	.	.	2690	.	.	.	.	.	.	.	.	.	2700	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions