Job Description P31455 Confidence 99.40% Date Thu Jan 5 11:47:46 GMT 2012 Rank 112 Aligned Residues 123 % Identity 15% Template c2oitA_ PDB info PDB header:oncoprotein Chain: A: PDB Molecule:nucleoporin 214kda; PDBTitle: crystal structure of the n-terminal domain of the human2 proto-oncogene nup214/can Resolution 1.65 Å

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		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.										.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.
Predicted Secondary structure																									.	.																.	.	.	.	.	.	.	.	.																												.
Query SS confidence																									.	.																.	.	.	.	.	.	.	.	.																												.
Query Sequence		A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	.	.	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	.	.	.	.	.	.	.	.	.	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	.	E	W	L
Query Conservation																									.	.																.	.	.	.	.	.	.	.	.																												.
Alig confidence																									.	.																.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		G	L	L	V	P	M	K	F	P	I	H	H	L	A	L	S	C	D	N	L	T	L	S	A	C	M	M	S	S	E	Y	G	S	I	I	A	F	F	D	V	R	T	F	S	N	E	A	K	Q	Q	K	R	P	F	A	Y	H	K	L	L	K	D	A	G	G	M	V	I	D	M	K	W	N	P	T	V	P	S	M	V
Template Known Secondary structure								S	S									T	T	S										T	T	T															T	T		S	S				S								S	G	G	G	S								S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		358	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure						.																																										.
Query SS confidence						.																																										.
Query Sequence		G	F	V	L	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W	.	M	E	G	G	Q	L	W	I	T	E	T	D
Query Conservation						.																																										.
Alig confidence						.																				.	.																					.
Template Conservation																										.	.
Template Sequence		A	V	C	L	A	D	G	S	I	A	V	L	Q	V	T	E	T	V	K	V	C	A	T	L	.	.	P	S	T	V	A	V	T	S	V	C	W	S	P	K	G	K	Q	L	A	V	G	K	Q	N	G	T	V	V	Q	Y	L	P	T
Template Known Secondary structure						T	T	S								S	S	S								.	.		G	G	G									T	T	S	S							T	T	S							T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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