Job Description P31455 Confidence 99.86% Date Thu Jan 5 11:47:46 GMT 2012 Rank 37 Aligned Residues 318 % Identity 13% Template c2j57J_ PDB info PDB header:oxidoreductase Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain; PDBTitle: x-ray reduced paraccocus denitrificans methylamine2 dehydrogenase n-quinol in complex with amicyanin. Resolution 2.25 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.										.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.
Query Sequence		T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	.	.	.	.	.	.	.	.	.	P	E	N	P	D	E	T	W	H
Query Conservation																																																																.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																									.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																									.	.	.
Template Sequence		A	P	D	A	R	R	V	Y	V	N	D	P	A	H	F	A	A	.	.	V	T	Q	Q	F	V	I	D	G	E	A	G	R	V	I	G	M	I	D	G	G	F	L	P	.	.	.	N	P	V	V	A	D	D	G	S	F	I	A	H	A	S	T	V	F	S	R	I	A	R	G	E	R	T	D	Y	V	E	V	F	D
Template Known Secondary structure					T	T								G	G	G		S	.	.	S								T	T	T	T										S	S		.	.	.						T	T	S	S												T	T
Template Predicted Secondary structure																			.	.																									.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	.	.	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P
Query Conservation																																																								.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	T	L	L	P	T	A	D	I	E	L	P	D	A	P	R	F	L	V	G	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	P	W	M	T	S	L	T	P	D	G	K	T	L	L	F	Y	Q	F	S	P	A	P	A	V	G	V	V	D	L	E	G	K	A	F	K	R	M	L	D	V	P	D	C	Y
Template Known Secondary structure		T	T	T										T	T							S			.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G					T	T	S									S	S	S								T	T	T	T										S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.														.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure										.	.																										.	.	.	.
Query SS confidence										.	.																										.	.	.	.
Query Sequence		V	N	V	Q	K	Q	H	P	.	.	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	.	.	.	.	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E
Query Conservation										.	.																										.	.	.	.
Alig confidence										.	.																										.	.	.	.
Template Conservation
Template Sequence		H	I	F	P	T	A	P	D	T	F	F	M	H	C	R	D	G	S	L	A	K	V	A	F	G	T	E	G	T	P	E	I	T	H	T	E	V	F	H	P	E	D	E	F	L	I	N	H	P	A	Y	S	Q	K	A	G	R	L	V	W	P	T	Y	T	G	K	I	H	Q	I	D	L	S	S	G	D	A	K	F	L
Template Known Secondary structure								T	T							T	T	S									S	S	S	S										S		T	T	S		B		S						T	T	T	T						B	T	T	S								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.							.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	.	.	.	.	.	.	N	G	I	V	Q	L	W	L	I
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	V	E	A	L	T	E	A	E	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	W	R	P	G	G	W	Q	Q	V	A	Y	H	R	A	L	D	R	I	Y	L	L	V	D	Q	R	D	E	W	R	H	K	T	A	S	R	F	V	V	V	L
Template Known Secondary structure						S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					S	S	S						T	T	T	T											T	T		T	T	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.																											.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.				.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	.	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D
Query Conservation																																				.	.	.
Alig confidence																.																				.	.	.																									.	.	.
Template Conservation																.																																															.	.	.
Template Sequence		D	A	K	T	G	E	R	L	A	K	F	E	M	G	.	H	E	I	D	S	I	N	V	S	Q	D	E	K	P	L	L	Y	A	L	S	T	G	D	K	T	L	Y	I	H	D	A	E	S	G	E	E	L	R	S	V	N	Q	L	G	H	G	.	.	.	P	Q	V	I	T	T	A	D
Template Known Secondary structure			T	T	T											.											S	S	S								T	T	T	T							T	T	T												S	S	.	.	.
Template Predicted Secondary structure																.																																															.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.				.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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