Job Description P31455 Confidence 97.46% Date Thu Jan 5 11:47:46 GMT 2012 Rank 153 Aligned Residues 179 % Identity 11% Template c2j04C_ PDB info PDB header:transcription Chain: C: PDB Molecule:hypothetical protein ypl007c; PDBTitle: the tau60-tau91 subcomplex of yeast transcription factor2 iiic Resolution 3.2 Å

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		232	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		D	T	L	S	P	K	G	E	K	.	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q
Query Conservation											.
Alig confidence											.																																															.
Template Conservation																																																										.
Template Sequence		L	T	W	A	R	D	G	T	L	Y	L	T	T	F	P	D	I	S	I	G	Q	P	K	Y	A	K	D	I	N	C	N	S	K	N	L	F	H	V	K	E	F	P	L	E	F	E	N	K	L	D	F	E	L	A	Q	Q	.	N	G	L	L	N	S	Q	P	V	C	Y	P	R	V	C	K	P	S	P	I	D	D	W
Template Known Secondary structure						T	T	S							S	S	S										S			S	S	B	G	G	G	T													T	T	T	T	S				S	.	S		S	S	T	T	S		S										S	S	S	S
Template Predicted Secondary structure																																																										.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.										.	.	.	.	.	.	380
Predicted Secondary structure																																																					.													.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.													.	.	.	.	.	.	.	.	.
Query Sequence		I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	D	N	R	I	A	C	A	H	A	Q	S	G	.	.	.	.	.	.	.	.	.	E	V	E	Y	L	T	E
Query Conservation																																																					.													.	.	.	.	.	.	.	.	.
Alig confidence							.	.																																													.													.	.	.	.	.	.	.	.	.
Template Conservation							.	.
Template Sequence		M	A	V	L	S	.	.	N	N	G	N	V	S	V	F	K	D	N	K	M	L	T	N	L	D	S	K	G	N	L	S	S	R	T	Y	H	C	F	E	W	N	P	I	E	S	S	I	V	V	G	N	E	D	G	E	L	Q	F	F	S	I	R	K	N	S	E	N	T	P	E	F	Y	F	E	S	S	I	R	L	S
Template Known Secondary structure							.	.	T	T	S						S	S	S	S								S	S		S	T	T	T									S	S	S	S							T	T	S											T	T	T													S
Template Predicted Secondary structure							.	.
Template SS confidence
		100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W	M	E	G	G	Q	L	W	I	T	E	T	D
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		D	A	G	S	K	D	W	V	T	H	I	V	W	Y	E	D	.	V	L	V	A	A	L	S	N	N	S	V	F	S	M	T	V	S
Template Known Secondary structure			T	T												T	T	.							T	T
Template Predicted Secondary structure																		.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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