Job Description P31455 Confidence 98.26% Date Thu Jan 5 11:47:46 GMT 2012 Rank 145 Aligned Residues 330 % Identity 12% Template c2iwkB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitrous oxide reductase; PDBTitle: inhibitor-bound form of nitrous oxide reductase from2 achromobacter cycloclastes at 1.7 angstrom resolution Resolution 1.7 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		T	F	A	P	R	N	H	L	L	T	N	T	N	T	W	T	P	.	.	.	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G
Query Conservation																			.	.	.
Alig confidence									.	.	.								.	.	.															.	.	.	.	.	.
Template Conservation									.	.	.																									.	.	.	.	.	.
Template Sequence		D	N	G	D	L	H	H	.	.	.	V	H	M	S	F	T	D	G	K	Y	D	G	R	Y	L	F	M	N	D	K	A	N	T	R	.	.	.	.	.	.	V	A	R	V	R	C	D	V	M	K	T	D	A	I	L	E	I	P	N	A	K	G	I	H	G	M	R	P	Q	K	W	P	R	S	N	Y	V	F	C	N
Template Known Secondary structure						B			.	.	.							T	T												T	T	T	T		.	.	.	.	.	.						T	T	T	T									S	S			S									S	S	B		S
Template Predicted Secondary structure									.	.	.																									.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.																																																								.	.
Query SS confidence									.	.	.	.	.	.	.																																																								.	.
Query Sequence		P	E	N	P	D	E	T	.	.	.	.	.	.	.	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	.	.	N	D	H	V	M	H	E	L	D
Query Conservation									.	.	.	.	.	.	.																																																								.	.
Alig confidence									.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.
Template Sequence		G	E	D	E	A	P	L	V	N	D	G	S	T	M	T	D	V	A	T	Y	V	N	I	F	T	A	V	D	A	D	K	W	E	V	A	W	Q	V	K	V	.	.	.	.	.	.	.	.	.	S	G	N	L	D	N	C	D	A	D	Y	E	G	K	W	A	F	S	T	S	Y	N	S	E	M	G	M	T	L	E	E
Template Known Secondary structure				S		B		S	S		S	S	S	S	T	T		G	G	G		B								T	T	T	T									.	.	.	.	.	.	.	.	.	S	S									S	S	S	S							S		T	T			S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.										.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	K	S	E	M	D	H	V	V	V	F	N	I	A	E	I	E	K	A	I	K	A	G	Q	Y	E	E	I	N	G	V	K	V	V	D	G	R	K	E	A	K	S	L	F	T	R	Y	I	P	I	A	N	N	P	.	.	.	.	.	.	.	.	.	.	.	H	G	C	N	M	A	P	D	R	K	H	L	C	V
Template Known Secondary structure			T		S	S																			T		S				T	T								G	G	G	T		S	S							S	S	S		.	.	.	.	.	.	.	.	.	.	.							T	T	S	S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.												.	.	.	.	.	290	.	.	.	.	.	.	.	.
		244	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		L	F	.	.	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I
Query Conservation				.	.
Alig confidence				.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Sequence		A	G	K	L	S	P	T	V	T	V	L	D	V	T	K	F	D	A	L	F	Y	D	N	A	E	P	R	S	A	V	V	A	E	P	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	G	P	L	H	T	A	F	.	.	D	G	R	G	N	A	Y	T	S	L	F	L	D	S	Q
Template Known Secondary structure				T	T	S	S	B						G	G	G							S				G	G	G	G						B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S								.	.		T	T	S							T	T	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.																			.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.											.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350						.	.	.	.	.	.	.	.	.	360	.	.															.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	L	W	L	I	S	P	Q	G	G	.	.	.	.	.	.	.	.	.	.	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	.	.	.	.	.	H	P	S	G	E	W	L	G	F	V	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	I	A	C	A	H	A	Q	S
Query Conservation													.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.						.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.
Template Sequence		V	V	K	W	.	.	N	I	D	E	A	I	R	A	Y	A	G	E	K	I	N	P	I	K	D	K	L	D	V	Q	Y	Q	P	G	H	L	K	T	V	M	G	E	T	L	D	A	A	N	D	W	L	V	C	L	C	K	F	S	K	D	R	F	L	N	V	G	P	L	K	P	E	N	D	Q	L	I	D	I	S	G
Template Known Secondary structure						.	.											T													S	S								T	T	T	T	S	T	T			S	S							S			G	G	G	S					S	S											S	S
Template Predicted Secondary structure						.	.
Template SS confidence
		359	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	M	V	L	V	H	D	G	P	T	F	A	E	P	H	D	A	I	A	V	S	P	S
Template Known Secondary structure		S	S										S	S										G	G
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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