Job Description P31455 Confidence 98.52% Date Thu Jan 5 11:47:46 GMT 2012 Rank 137 Aligned Residues 320 % Identity 11% Template c2ismA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of the putative oxidoreductase (glucose2 dehydrogenase) (ttha0570) from thermus theromophilus hb8 Resolution 1.90 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		Q	I	T	F	A	P	R	N	H	L	L	T	N	T	N	T	W	T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	.	.	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H
Query Conservation																																																								.	.
Alig confidence																														.	.	.	.	.	.	.	.																			.	.
Template Conservation																														.	.	.	.	.	.	.	.
Template Sequence		R	V	E	E	V	V	G	G	L	E	V	P	W	A	L	A	F	L	P	D	G	G	M	L	I	A	E	R	.	.	.	.	.	.	.	.	P	G	R	I	R	L	F	R	E	G	R	L	S	T	Y	A	E	L	S	V	Y	H	R	G	E	S	G	L	L	G	L	A	L	H	P	R	F	P	Q	E	P	Y	V	Y
Template Known Secondary structure											S									T	T	S							T	.	.	.	.	.	.	.	.	T	T							T	T													S	T	T		S								T	T	T	T	T	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		G	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	.	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N
Query Conservation																																																																	.
Alig confidence		.	.	.																																																													.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	Y	R	T	V	A	E	G	G	L	R	N	Q	V	V	R	L	R	H	L	G	E	R	G	V	L	D	R	V	V	L	D	G	I	P	A	R	P	H	G	L	H	S	G	G	R	I	A	F	G	P	D	G	M	L	Y	V	T	T	G	E	V	Y	E	R	E	L	A	Q	D	L	A	S	L	G	G	K
Template Known Secondary structure		.	.	.							T	T	S	S											S	S																T	T												T	T	S									T	T		G	G	G	G	G		T	T		S	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	R	L	T	P	E	G	E	P	A	P	G	N	P	F	L	G	R	R	G	A	R	P	E	V	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	H	R	N	P	Q	G	L	A	W	H	P	K	T	G	E	L	F	S	S	E	H	G	P	G	H	D	E	V	N	L	I	V	P	G	G	N	Y
Template Known Secondary structure							T	T	S	S	B		T	T		T	T	T	T		T	T	S		T	T				.	.	.	.	.	.	.	.	.	.	.	.	.				S									T	T	T																				T	T		B
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.														.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q
Query Conservation
Alig confidence																			.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	W	P	R	V	V	G	R	G	N	D	P	R	Y	R	D	P	.	.	L	Y	F	W	P	Q	G	F	P	P	G	N	L	A	F	F	R	G	D	L	Y	V	A	G	L	R	G	Q	A	L	L	R	L	V	L	E	G	E	R	G	R	W	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T			S					T	T	S				.	.	S				T	T											T	T							T	T	T	T											T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T
Query Conservation																																	.	.
Alig confidence		.																															.	.									.
Template Conservation		.																																									.
Template Sequence		.	V	L	R	V	E	T	A	L	S	G	F	G	R	L	R	E	V	Q	V	G	P	D	G	A	L	Y	V	T	T	S	N	R	D	G	R	G	Q	V	R	P	.	G	D	D	R	V	L	R	L	L
Template Known Secondary structure		.										S	S										T	T	S								S	T	T	T	T	S				T	.	T		S
Template Predicted Secondary structure		.																																									.
Template SS confidence
			304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions