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Job DescriptionP31455
Confidence99.60%DateThu Jan 5 11:47:46 GMT 2012
Rank97Aligned Residues233
% Identity20%Templatec2hu7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:acylamino-acid-releasing enzyme; PDBTitle: binding of inhibitors by acylaminoacyl peptidase
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
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Query Sequence  TNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQGAHVGVVTVHPKSEKYVFIHGPENPDETWHYDFHH
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Template Sequence  SLQGVVDGDKLLVVGFSEGSV. . . . NAYLYD. . GGETVKLNREPIN. . SVLDPHYGVGRVILVRDVSKGA. . . . . . . . . .
Template Known Secondary structure  TTTTT....S..SSS


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   26...30.........40...... ...50.. .......60..... ....70.........80.......
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
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Query Sequence  RRGVIVEGGKMSNLDAMDITAPYTPGVLRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQH
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Template Sequence  . . . . . . . EQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   88.90.........100.........110.........120.........
 
   187..190.........200.........210.........220.........230.........240.........250.........260......
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Query Sequence  PREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKAAGDAPLSG
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   267..270.........280.........290.........300.........310.........320.........330.........340......
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Query Sequence  TETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQS
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Template Sequence  . . . . . . . . . . TEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS. GEGSFS
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   130.........140.........150.........160.........170.........180.........190.. ......
 
   347..350.........360. ........370.........380..... ....390.........400......
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Query Sequence  AFNWHPSGEWLGFVL. . . DNRIACAHAQSGEVEYLTEHHANS. . . . . PSADAVVFSPDGQWLAWMEGG
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Template Sequence  SASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE
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   199200.........210.........220.........230.........240.........250.........260......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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