Job Description P31455 Confidence 99.85% Date Thu Jan 5 11:47:46 GMT 2012 Rank 40 Aligned Residues 335 % Identity 13% Template c2h47F_ PDB info PDB header:oxidoreductase/electron transport Chain: F: PDB Molecule:aromatic amine dehydrogenase; PDBTitle: crystal structure of an electron transfer complex between2 aromatic amine dephydrogenase and azurin from alcaligenes3 faecalis (form 1) Resolution 2.60 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		P	R	N	H	L	L	T	N	T	N	T	W	T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																				.																																		.	.	.																				.	.	.	.	.	.
Template Conservation																				.																																		.	.	.
Template Sequence		P	R	E	V	L	T	G	G	H	S	V	S	A	P	Q	E	N	R	.	I	Y	V	M	D	S	V	F	M	H	L	T	E	S	R	V	H	V	Y	D	Y	T	N	G	K	F	L	G	M	V	P	T	A	.	.	.	F	N	G	H	V	Q	V	S	N	D	G	K	K	I	Y	T	M	T	T	Y	H	E	R	I	T
Template Known Secondary structure				S									S	S		G	G	G		.								G	G	G	G	G	G								T	T	T	T										.	.	.									T	T	S	S										T	T	S	S
Template Predicted Secondary structure																				.																																		.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
					93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																																															.	.
Query SS confidence		.	.	.																																																															.	.
Query Sequence		.	.	.	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	.	.	N	D	H	V	M	H	E	L	D	P	A	L	D
Query Conservation		.	.	.																																																															.	.
Alig confidence		.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	K	R	S	D	V	V	E	V	W	D	A	D	K	L	T	F	E	K	E	I	S	L	P	P	K	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	L	N	Y	D	G	L	F	R	Q	T	T	D	G	K	F	I	V	L	Q	N	A	S	P	A	T	S	I	G	I	V	D	V	A	K	G
Template Known Secondary structure		S	S											T	T	T	T										T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			G	G	G					T	T	S	S								S	S	S								T	T	T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.															.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	.	.	.	.	.	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P
Query Conservation																																																											.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		D	Y	V	E	D	V	T	A	A	A	G	C	W	S	V	I	P	Q	P	N	R	P	.	.	.	.	.	.	R	S	F	M	T	I	C	G	D	G	G	L	L	T	I	N	L	G	E	D	G	K	V	A	S	Q	S	R	S	K	Q	M	F	S	V	K	D	D	P	I	F	I	A	P	A	L	D	K	D	K	A	H
Template Known Secondary structure								G	G	G	T	T								T	T	S	T	.	.	.	.	.	.	T							T	T	S									T	T	S	S											S		T	T	T	S		B		S						S	S
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	.	.	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G
Query Conservation																																																										.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	N	V	Y	S	A	D	F	S	G	D	E	V	K	V	D	G	P	W	S	L	L	N	D	E	D	K	A	K	N	W	V	P	G	G	Y	N	L	V	G	L	H	R	A	S	G	R	M	Y	V	F	M	H	P	D	G	K
Template Known Secondary structure				B	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S								S	S	S	S									S									T						S	S						T	T	T	T								S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.																			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		321	.								.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.
Query Sequence		I	V	.	.	.	.	.	.	.	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F
Query Conservation				.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.																							.	.
Template Conservation																																	.	.
Template Sequence		E	G	T	H	K	F	P	A	A	E	I	W	V	M	D	T	K	T	K	Q	R	V	A	R	I	P	G	R	D	A	L	.	.	S	M	T	I	D	Q	Q	R	N	L	M	L	T	L	D	G	G	N	V	N	V	Y	D	I	S	Q	P	E	P	K	L	L	R	T	I	E	G	A	A	E	A	S	L	Q	V	Q	F
Template Known Secondary structure		T	T		T	T				S							T	T	T	T									T	T			.	.						T	T	T	T						S	S	S								S	S	S	S								T	T	S		S	S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		394	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	P	V	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions