Job Description P31455 Confidence 99.84% Date Thu Jan 5 11:47:46 GMT 2012 Rank 42 Aligned Residues 278 % Identity 9% Template c2gopB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:trilobed protease; PDBTitle: the beta-propeller domain of the trilobed protease from pyrococcus2 furiosus reveals an open velcro topology Resolution 2.00 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V
Query Conservation
Alig confidence																	.																						.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation																	.																						.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		R	T	K	G	E	L	V	A	Y	V	L	T	K	A	D	.	N	K	Y	E	N	T	I	V	I	E	N	L	K	N	N	A	R	R	F	I	E	.	.	.	.	.	.	N	A	T	M	P	R	I	S	P	D	G	K	K	I	A	F	M	R	A	N	E	E	K	K	V	S	E	I	W	.	.	.	.	.	.	V	A
Template Known Secondary structure					T	T											.		S										T	T	T								.	.	.	.	.	.	T								T	T	S	S									T	T	T	T						.	.	.	.	.	.
Template Predicted Secondary structure																	.																						.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.							.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.							.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	E	T	L	S	S	K	K	I	L	E	A	K	.	.	.	.	.	.	.	.	.	.	.	.	N	I	R	S	L	E	W	N	E	D	S	R	K	L	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T										S	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.													.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																	.																																			.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																	.																																			.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	V	G	F	K	D	G	E	K	T	T	F	W	I	F	D	T	E	S	E	E	V	I	E	E	F	E	K	P	R	F	S	S	.	G	I	W	H	R	D	K	I	V	V	N	V	P	H	R	E	I	I	P	Q	Y	F	K	F	W	D	I	Y	I	W	E	D	G	K	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.																T	T	T	T										T	T			.					T	T											S	S			S	S										T	T		.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																	.																																			.	.	.	.	.
Template SS confidence
										121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	.	.	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F
Query Conservation																																																				.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	K	M	F	E	K	V	S	F	Y	A	V	D	S	D	G	E	R	I	L	L	Y	G	K	P	E	K	K	Y	M	S	E	H	N	K	L	Y	I	Y	D	G	K	E	V	M	G	I	L	D	E	V	D	R	G	V	G	Q	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S								S	S	S								T	T		T	T		S								S	S	S					S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.					.	.	.	410	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		N	W	H	P	S	G	E	W	L	G	F	V	L	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W	M	E	G	G	.	.	.	.	Q	L	W	I	T	E
Query Conservation																																																												.	.	.	.
Alig confidence																									.									.	.	.	.	.																						.	.	.	.
Template Conservation																									.									.	.	.	.	.
Template Sequence		K	I	K	D	G	K	V	Y	F	T	L	F	E	E	G	S	V	N	L	Y	I	W	D	.	G	E	I	K	P	I	A	K	.	.	.	.	.	G	R	H	W	I	M	G	F	D	V	D	E	I	V	V	Y	L	K	E	T	A	T	R	L	R	E	L	F	T	W	D
Template Known Secondary structure					T	T									T	T								S	.	S	S							.	.	.	.	.	S	S	S								S	S	S								S	S	S								S
Template Predicted Secondary structure																									.									.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions