Job Description P31455 Confidence 98.51% Date Thu Jan 5 11:47:46 GMT 2012 Rank 138 Aligned Residues 261 % Identity 9% Template c2fp8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:strictosidine synthase; PDBTitle: structure of strictosidine synthase, the biosynthetic entry to the2 monoterpenoid indole alkaloid family Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	N	S	F	T	F	D	S	T	N	K	G	F	Y	T	S	V	Q	D	G	R	V	I	K	Y	E	G	P	N	S	G	F	V	D	F	A	Y	A	S	P	Y	W	N	K	A	F	C	E	N	S	T	D	A	E	K	R	P	L	C	G	R	T	Y	D	I	S	Y	N	L	Q	N	N	Q	L	Y	I	V	D	C
Template Known Secondary structure										T	T		S	S						T	T	S								T	T	T								S		T	T							T	T				G	G	G														T	T	T	T							T
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q
Query Conservation
Alig confidence																																																																											.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		Y	Y	H	L	S	V	V	G	S	E	G	G	H	A	T	Q	L	A	T	S	V	D	G	V	P	F	K	W	L	Y	A	V	T	V	D	Q	R	T	G	I	V	Y	F	T	D	V	S	T	L	Y	D	D	R	G	V	Q	Q	I	M	D	T	S	D	K	T	G	R	L	I	K	Y	D	P	.	.	.	.	.	.	.
Template Known Secondary structure		T	T							T	T									S			T	T				S									T	T	T								S		S	S			T	T									T											T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V
Query Conservation
Alig confidence		.	.	.	.																																										.	.
Template Conservation		.	.	.	.																																										.	.
Template Sequence		.	.	.	.	S	T	K	E	T	T	L	L	L	K	E	L	H	V	P	G	G	A	E	V	S	A	D	S	S	F	V	L	V	A	E	F	L	S	H	Q	I	V	K	Y	W	.	.	L	E	G	P	K	K	G	T	A	E	V	L	V	K	I	P	N	P	G	N	I	K	R	N	A	D	G	H	F	W	V	S	S
Template Known Secondary structure		.	.	.	.	T	T	T										S									T	T	S	S							G	G	G	T							.	.	S	S	S	T	T	T	T									S	S								T	T	S
Template Predicted Secondary structure		.	.	.	.																																										.	.
Template SS confidence
						195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		361		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.						.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure			.																																						.	.	.	.	.
Query SS confidence			.																																						.	.	.	.	.
Query Sequence		L	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	.	.	.	.	.	W	L	A	W	M	E	G	G	Q	L	W	I	T	E	T	D
Query Conservation			.																																						.	.	.	.	.
Alig confidence			.																		.	.	.	.																	.	.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		S	E	E	L	D	G	N	M	H	G	R	V	D	P	K	G	I	K	F	.	.	.	.	D	E	F	G	N	I	L	E	V	I	P	L	P	P	P	F	A	G	E	H	F	E	Q	I	Q	E	H	D	G	L	L	Y	I	G	T	L	F
Template Known Secondary structure					T	T	S	S	T	T	S										.	.	.	.		T	T	S										T	T	T	T	T	S									T	T							S	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions