Job Description P31455 Confidence 99.87% Date Thu Jan 5 11:47:46 GMT 2012 Rank 33 Aligned Residues 361 % Identity 14% Template c2eepA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl aminopeptidase iv, putative; PDBTitle: prolyl tripeptidyl aminopeptidase complexed with an inhibitor Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	V	L	Y	Q	D	R	A	M	K	Q	I	T	F	A	P	R	N	H	L	L	T	N	T	N	T	W	T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	Y	R	A	S	Q	G	A	H	V	G	V	V	T	V	H	P
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.																				.	.
Template Conservation																																												.	.	.	.	.	.	.																				.	.
Template Sequence		G	D	D	L	V	F	N	K	T	T	R	F	S	A	A	D	L	N	A	L	M	P	F	P	S	F	R	T	L	D	A	G	R	G	L	V	V	L	F	T	Q	G	.	.	.	.	.	.	.	G	L	V	G	F	D	M	L	A	R	K	V	T	Y	L	F	D	T	N	.	.	E	E	T	A	S	L	D	F	S	P
Template Known Secondary structure		T	T																													T	T	T	T							T	T	.	.	.	.	.	.	.							T	T	T	T									T	.	.	T			T	T					T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.																				.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	E	K	Y	V	F	I	H	G	P	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L
Query Conservation
Alig confidence																																												.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.																											.	.	.	.	.	.	.	.	.
Template Sequence		V	G	D	R	V	A	Y	V	R	N	H	N	L	Y	I	A	R	G	G	K	L	G	E	G	M	S	R	A	I	A	V	T	I	D	G	T	E	T	L	V	Y	G	.	.	.	Q	A	V	H	Q	R	E	F	G	I	E	K	G	T	F	W	S	P	K	G	S	C	L	A	F	Y	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S	S							T	T								B		T	T	S								S		S			B	T	T				S	.	.	.	S			G	G	G		T	T				S					T	T	S	S						.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.																											.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	V	L	V	S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	.	.	.	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E
Query Conservation																																																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																					.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	R	M	D	Q	S	M	V	K	P	T	P	I	V	D	Y	H	P	L	E	A	E	S	K	P	L	Y	Y	P	M	A	G	T	P	S	H	H	V	T	V	G	I	Y	H	L	A	T	G	K	T	V	Y	L	Q	T	G	E	P	K	E	K	F	L	T	N	L	S	W	S	P	D	E	N
Template Known Secondary structure		.	.	.	.	.	.	.	.					T	T	S										S	S	S										B	T	T	S												T	T	T	T									S		T	T										T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V	Q	R	R	L	T	F	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		I	L	Y	V	A	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	A	Q	N	E	C	K	V	N	A	Y	D	A	E	T	G	R	F	V	R	T	L	F	.	.	.	V	E	T	D	K	H	Y	V	E	P	L	H	P	L	T	F	L	P	G	S	N	N	Q	F	I	W	Q	S	R	R	D
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S										T	T	T									.	.	.					S	S						S						T	T		S	S								T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		297	.	.	300	.	.	.																.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.							.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A	F	N	W	H	P	S	G	E	W	L	G	F	V	L	.	.	.	.	.	.	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F
Query Conservation																																												.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.																				.	.	.	.
Template Conservation																																																																					.	.	.	.
Template Sequence		G	W	N	H	L	Y	L	Y	D	T	T	G	R	L	I	R	Q	V	T	K	G	E	W	E	V	T	N	F	A	G	F	D	P	K	G	T	R	L	Y	F	E	S	T	E	A	S	P	L	E	R	H	F	Y	C	I	D	I	K	G	G	K	T	K	D	L	T	P	.	.	.	.	E	S	G	M	H	R	T	Q	L
Template Known Secondary structure		S	S								T	T	S							S		S	S	S										T	T	S								S	S	S		T	T		B							T	T							S			.	.	.	.	S	S	S
Template Predicted Secondary structure																																																																					.	.	.	.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.					.	.	.	.	430	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.						.	.	.	410	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		S	P	D	G	Q	W	L	A	W	M	E	G	G	.	.	.	.	.	Q	L	W	I	T	E	T	D
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		S	P	D	G	S	A	I	I	D	I	F	Q	S	P	T	V	P	R	K	V	T	V	T	N	I	G
Template Known Secondary structure			S	S	S	S									S	S		S								T	T
Template Predicted Secondary structure
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions