Job Description P31455 Confidence 100.00% Date Thu Jan 5 11:47:46 GMT 2012 Rank 1 Aligned Residues 395 % Identity 10% Template c1k32E_ PDB info PDB header:hydrolase Chain: E: PDB Molecule:tricorn protease; PDBTitle: crystal structure of the tricorn protease Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.
Query Sequence		A	G	P	V	L	Y	Q	D	R	A	M	K	Q	I	T	F	A	P	R	N	H	L	L	T	N	T	N	T	W	T	P	D	S	Q	W	L	V	F	D	V	R	P	S	G	A	S	F	T	G	E	T	I	E	R	V	N	I	H	T	G	E	V	E	V	I	.	.	.	.	.	Y	R	A	S	Q	G	A	H	V	G
Query Conservation																																																																			.	.	.	.	.
Alig confidence																																																	.																		.	.	.	.	.
Template Conservation																																																	.
Template Sequence		C	D	D	L	W	E	H	D	L	K	S	G	S	T	R	K	I	V	S	N	L	G	V	I	N	N	A	R	F	F	P	D	G	R	K	I	A	I	R	V	M	R	G	S	S	L	N	.	T	A	D	L	Y	F	Y	N	G	E	N	G	E	I	K	R	I	T	Y	F	S	G	K	S	T	G	R	R	M	F	T	D
Template Known Secondary structure		T	T							T	T	T									S	S	S									T	T	S	S									S	T	T			.									T	T	T	T													B	T	T	B			S
Template Predicted Secondary structure																																																	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	T	V	H	P	K	S	E	K	Y	V	F	I	H	G	P	.	.	.	E	N	P	D	E	T	W	H	Y	D	F	H	H	R	R	G	V	I	V	E	G	G	K	M	S	N	L	D	A	M	D	I	T	A	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	G	F	D	P	D	G	N	L	I	I	S	T	D	A	M	Q	P	F	S	S	M	T	C	L	Y	R	V	E	N	D	G	I	N	F	V	P	L	N	L	G	P	A	T	H	I	L	F	A	D	G	R	R	V	I	G	R	N	T	F	E	L	P	H	W	K	G	Y	R	G	G	T	R	G	K	I	W	I	E
Template Known Secondary structure							T	T	S								T	T	S	S	S	T	T									G	G	G	T									S		S						T	T							S		S			T	T	S	T	T			S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
									130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																																				.	.	.
Query SS confidence		.	.	.	.	.	.	.																																																																				.	.	.
Query Sequence		.	.	.	.	.	.	.	T	P	G	V	L	R	G	G	S	H	V	H	V	F	S	P	N	G	E	R	V	S	F	T	Y	N	D	H	V	M	H	E	L	D	P	A	L	D	L	R	N	V	G	V	A	A	P	F	G	P	V	N	V	Q	K	Q	H	P	R	E	Y	S	G	S	H	W	C	.	.	.	V	L	V
Query Conservation		.	.	.	.	.	.	.																																																																				.	.	.
Alig confidence		.	.	.	.	.	.	.																			.																																																	.	.	.
Template Conservation																											.
Template Sequence		V	N	S	G	A	F	K	K	I	V	D	M	S	T	H	V	S	S	P	V	I	V	G	H	R	.	I	Y	F	I	T	D	I	D	G	F	G	Q	I	Y	S	T	D	L	D	G	K	D	L	R	K	H	T	S	F	T	D	Y	Y	P	R	H	L	N	T	D	G	R	R	I	L	F	S	K	G	G	S	I	Y	I
Template Known Secondary structure				T	T									S	S									T	T		.							T	T	S	S								T	T	S		S									S	S								S	S	S							T	T
Template Predicted Secondary structure																											.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	T	T	P	T	P	Q	P	G	S	D	E	I	N	R	A	Y	E	E	G	W	V	G	N	H	A	L	A	F	I	G	D	T	L	S	P	K	G	E	K	V	P	E	L	F	I	V	E	L	P	Q	D	E	A	G	W	K	A	A	G	D	A	P	L	S	G	T	E	T	T	L	P	A	P	P	R	G	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	P	D	T	E	K	I	E	K	I	E	I	G	D	L	E	S	P	E	D	R	I	I	S	I	P	S	K	F	A	E	D	F	S	P	L	D	G	D	L	I	A	F	V	S	R	G	Q	A	F	I	Q	D	V	S	G	T	Y	V	L	K	V	P	E	P	L	R	I	R	Y	V	R	R	G	G	D	T	K	V
Template Known Secondary structure				T	T	T	T															S						G	G	G	G								G	G	G							T	T							T	T	S	S	S								S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		280	.	.	.	.	.													.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	R	L	T	F	.	.	.	.	.	.	.	.	.	.	.	.	T	H	H	R	A	Y	P	G	L	V	N	V	P	R	H	W	V	R	C	N	P	Q	G	T	Q	I	A	F	L	M	R	D	D	N	G	I	V	Q	L	W	L	I	S	P	Q	G	G	E	P	R	Q	L	T	H	N	K	T	D	I	Q	S	A
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		A	F	I	H	G	T	R	E	G	D	F	L	G	I	Y	D	Y	R	T	G	K	A	E	K	F	E	E	N	L	G	N	V	F	A	M	G	V	D	R	N	G	K	F	A	V	V	A	N	D	R	F	E	.	.	.	.	I	M	T	V	D	L	E	T	G	K	P	T	V	I	E	R	S	R	E	A	M	I	T	D
Template Known Secondary structure								S	S									T	T	T												S								T	T	S	S							T	T	S		.	.	.	.						T	T	T										S	S	S
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.					.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		348	.	350	.	.	.	.	.	.	.	.	.	360												.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	N	W	H	P	S	G	E	W	L	G	F	V	.	.	.	.	.	.	.	.	.	.	.	L	D	N	R	I	A	C	A	H	A	Q	S	G	E	V	E	Y	L	T	E	H	H	A	N	S	P	S	A	D	A	V	V	F	S	P	D	G	Q	W	L	A	W	M	E	G
Query Conservation															.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation																																															.	.	.
Template Sequence		F	T	I	S	D	N	S	R	F	I	A	Y	G	F	P	L	K	H	G	E	T	D	G	Y	V	M	Q	A	I	H	V	Y	D	M	E	G	R	K	I	F	A	A	T	T	E	.	.	.	N	S	H	D	Y	A	P	A	F	D	A	D	S	K	N	L	Y	Y	L	S	Y
Template Known Secondary structure						T	T	S											S	S	T	T		S	S										T	T	T	T						S		S	.	.	.	S	S	B								T	T	S	S							S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.				.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.