Job Description P25960 Confidence 98.21% Date Thu Jan 5 11:42:47 GMT 2012 Rank 1 Aligned Residues 134 % Identity 17% Template c3s0xB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:peptidase a24b, flak domain protein; PDBTitle: the crystal structure of gxgd membrane protease flak Resolution 3.60 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	L	Y	F	C	F	V	L	T	L	S	V	I	D	F	R	T	Q	L	L	P	D	K	L	T	L	P	L	L	W	L	G	L	V	F	N	A	Q	Y	G	L	I	D	L	H	D	A	V	Y	G	A	V	A	G	Y	G	V	L	W	C	V	Y	W	G	V	W	L	V	C	H	K	E	G	L	G	Y	G	D	F
Query Conservation
Alig confidence																																																																								.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		Y	I	I	G	A	L	G	L	I	I	A	S	V	Q	D	F	R	S	R	E	I	E	D	Y	I	W	I	F	L	A	V	F	G	V	L	F	A	I	Y	S	S	I	T	L	L	D	Y	S	I	L	I	N	S	I	S	G	F	V	I	C	F	I	L	G	Y	X	X	F	L	S	.	.	.	G	I	G	G	G	D	G
Template Known Secondary structure															T	T					S																											S																							T	.	.	.	T	S
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.				.	.	.	.	.	.	580
		160	.	.	.	.	.																								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.												.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	L	A	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	W	C	G	W	Q	T	L	P	M	I	L	L	I	A	S	L	G	G	I	G	Y	A	I	V	S	Q	L	L	Q	R	R	T	I	T	T	.	.	.	.	.	.	.	.	.	.	.	I	A	F
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	X	L	I	G	L	G	A	L	V	P	K	F	Q	X	P	I	Y	T	S	L	G	T	L	L	N	L	N	Y	V	P	T	F	P	I	X	V	F	I	N	G	I	F	F	X	V	F	L	P	F	V	I	L	F	R	N	I	L	N	G	A	R	P	K	I	L	X	F	F	G	E	K	X	V	T	P	Q	I	P	L
Template Known Secondary structure									T	T	S	S	S							S						T		S	S	S																T	T																								S										T
Template Predicted Secondary structure
Template SS confidence
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
		206	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	W	L	A	L	G	S	M	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	P	I	T	L	S	Y	L	V	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		706	.	.	.	710	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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