Return to main results Retrieve Phyre Job Id

Job DescriptionP25960
Confidence18.23%DateThu Jan 5 11:42:47 GMT 2012
Rank71Aligned Residues18
% Identity11%Templatec2kreA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:ubiquitin conjugation factor e4 b; PDBTitle: solution structure of e4b/ufd2a u-box domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50......
Predicted Secondary structure 













Query SS confidence 

















Query Sequence  QVLVHFRQKKYAWHDTVP
Query Conservation 

 
  
   
    


Alig confidence 

















Template Conservation     

 
  

    
 
Template Sequence  SPTDPFNRQTLTESMLEP
Template Known Secondary structure 
SB
SSS

B

TTSS
Template Predicted Secondary structure 

















Template SS confidence 

















   1265....1270.........1280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions