 |
Job Description | P25960 | Confidence | 36.94% | Date | Thu Jan 5 11:42:47 GMT 2012 |
Rank | 21 | Aligned Residues | 53 |
% Identity | 17% | Template | c2kr6A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:presenilin-1; |
PDBTitle: solution structure of presenilin-1 ctf subunit
|
Resolution | UNK |
|
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
|
. | . | . | . | |
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | G | Y | G | D | F | K | L | L | A | A | A | . |
. |
. |
G | A | W | C | . |
. |
G | W | Q | T | L | P | M | I | L | L | I | A | S | L | G | G | I | G | Y | A | I | V | S | Q | L | L | Q | R | R | T | I | T | T | I | A | F |
Query Conservation |   |
  |
|
|   |
|
|
|
|
|   |   |   |
| . | . | . |
|
|   |
| . | . |
|   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
Template Sequence |   |
K | L | G | L | G | D | F | I | F | Y | S | V | L | V | G | K | A | S | A | T | A | S | G | D | W | N | T | T | I | A | C | F | V | A | I | L | I | G | L | C | L | T | L | L | L | L | A | I | F | K | K | A | L | P | A | L | P | I |
Template Known Secondary structure |   |
S | S |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
| S | S | S | S | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|