 |
Job Description | P22634 | Confidence | 28.00% | Date | Thu Jan 5 11:39:02 GMT 2012 |
Rank | 219 | Aligned Residues | 69 |
% Identity | 22% | Template | d1llca1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 3.00 |
|
 |
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
. | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
Query Sequence |   |
L | P | D | L | H | Y | I | Y | A | F | D | N | V | A | F | P | Y | G | E | K | S | E | A | F | I | V | . |
. |
. |
E | R | V | V | A | I | V | T | A | V | Q | E | R | Y | P | L | A | L | A | V | V | . |
A | C | N | T | A | S | T | V | S | L | P | A | L | R | E | K | F | D | F | P | . |
. |
. |
V | V | G | V |
Query Conservation |   |
|
|   |
|   |   |
|
|   |   |
|   |
|   |   |
|
|
|   |
|
|   |
|   |
|   | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
|
|
| . |
|
|
|
|
|
|   |   |
|
|
|   |
|
|   |   |   |   |
|
| . | . | . |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
| . |   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|   |   |   |   |   | . |   |   |   |   |   |   |
|
|   |
|   |   |
|
|   |
|   |
Template Sequence |   |
A | K | D | A | D | L | V | V | I | T | A | G | A | P | K | Q | P | G | E | T | R | L | D | L | V | N | K | N | L | K | I | L | K | S | I | V | D | P | I | . |
V | D | S | G | F | N | L | I | F | L | V | A | A | N | P | V | D | I | L | T | . |
Y | A | T | W | K | L | S | G | F | P | K | N | R | V | V | G | S |
Template Known Secondary structure |   |
T | S | S |
| S |  |  |  |
| B | T |
|
|
| S | S |
| S | S | S |
| S | T |  |  |  |  | T | T | S | T | T | T | T | T | T |  |  |  | . |  |  | T | T |
|
| S |  |  |  |
| B |
| S | S |  |  |  |  |  | . |  |  |  |  |  |  |  |
|
|
| T | T | T |  |  |
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|