Return to main results Retrieve Phyre Job Id

Job DescriptionP22634
Confidence64.08%DateThu Jan 5 11:39:02 GMT 2012
Rank72Aligned Residues162
% Identity15%Templatec3zu0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nad nucleotidase; PDBTitle: structure of haemophilus influenzae nad nucleotidase (nadn)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31.... ....40.........50.........60.........70.........80.........90..... ....100....
Predicted Secondary structure 

....
























..
Query SS confidence 




. . . .



























































. .








Query Sequence  VGGLS. . . . VYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTA. . STVSLPALR
Query Conservation 




....

  
   

 
  

  
 
  


 

 
 
          
    
 
 







..
  


 

Alig confidence 




....





















.....
















.














..








Template Conservation   

 
     
   
    
 
 




   .....

  
    
      
.
 

 
    





 
   
    
Template Sequence  IGGFSAVNAKLNKLRKKYKNPLVLHAGDAIT. . . . . GTLYFTLFGGSADAAVM. NAGNFHYFTLGNHEFDAGNEGLLKLL
Template Known Secondary structure 
SSS
S

S
.....SSTTTT.TTT
S

SGGGTT
Template Predicted Secondary structure 











.....






.











Template SS confidence 















































































   67..70.........80.........90....... ..100.........110.... .....120.........130.........140
 
   105....110... ......120.........130.........140.........150.........160.........170...
Predicted Secondary structure 



...........





















Query SS confidence 








. . . . . . . . . . .



























































Query Sequence  EKFDFPVVG. . . . . . . . . . . VVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKL
Query Conservation      




...........

 
   
      
 





  

 
  
   
        
       

 


 
 
Alig confidence 








...........




















....





















.............
Template Conservation       
 
 


                
    
 





....                    
 .............
Template Sequence  EPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIG. . . . LDTVNKTVNSSSPGKDVKFYDE. . . . . . . . . . . . .
Template Known Secondary structure  TT

S

SS
TTSTTTTS
BSTT....
SS


TT

.............
Template Predicted Secondary structure 

















....















.............
Template SS confidence 















































































   141........150.........160.........170.........180. ........190.........200...
 
   174.....180.........190.........200.........210.. .......220.....
Predicted Secondary structure 











.




Query SS confidence 






































.












Query Sequence  HGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQE. ELLQVLPEGTRLV
Query Conservation           
   
        
 
 






 


  . 
       
 

Alig confidence  ......










..











.






.






.




Template Conservation  ......          
..   
 
 

 
 .
 
   
  

    . 

 
Template Sequence  . . . . . . IATAQIMANAL. . KQQGINKIILLS. HAGSEKNIEIAQKVN. DIDVI
Template Known Secondary structure  ........TTT


.T

S.S

Template Predicted Secondary structure  ........



.





.


Template SS confidence 




















































   204.....210.... .....220...... ...230.........240. .....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions