Job Description P22634 Confidence 25.85% Date Thu Jan 5 11:39:02 GMT 2012 Rank 233 Aligned Residues 92 % Identity 13% Template c3psfA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(236-1259) Resolution 2.59 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		T	P	C	L	A	A	T	P	S	E	P	R	P	T	V	L	V	F	D	S	G	V	G	G	.	L	S	V	Y	D	E	I	R	H	L	L	P	D	L	H	Y	I	Y	A	F	D	N	V	A	F	P	Y	G	E	K	S	E	A	F	I	V	E	R	V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A	L	A
Query Conservation																										.
Alig confidence																										.																																	.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		A	P	F	I	P	N	V	R	D	P	K	I	P	K	I	L	S	L	T	C	G	Q	G	R	F	G	A	D	A	I	I	A	V	Y	V	N	R	K	G	D	F	I	R	D	Y	K	I	V	D	N	P	F	D	K	T	N	P	.	.	.	.	E	K	F	E	D	T	L	D	N	I	I	Q	S	C	Q	P	N	A	I
Template Known Secondary structure						S		T	T	S												T	T			T	T	T	S									T	T	S										S		T	T		S	S			.	.	.	.																	S
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		736	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.					.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.
		89	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		V	V	.	A	C	N	T	A	S	T	V	S	L	P	A	L	R	E
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		G	I	N	G	P	N	P	K	T	Q	K	F	Y	K	R	L	Q	E
Template Known Secondary structure						S	S	T
Template Predicted Secondary structure
Template SS confidence
		812	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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