Job Description P22634 Confidence 100.00% Date Thu Jan 5 11:39:02 GMT 2012 Rank 14 Aligned Residues 203 % Identity 18% Template c3ojcD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative aspartate/glutamate racemase; PDBTitle: crystal structure of a putative asp/glu racemase from yersinia pestis Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.									.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.												.	.	.	.	.	.	.	.												.	.
Query SS confidence																.	.	.	.	.	.												.	.	.	.	.	.	.	.												.	.
Query Sequence		V	L	V	F	D	S	G	V	G	G	L	S	V	Y	.	.	.	.	.	.	D	E	I	R	H	L	L	P	D	L	H	.	.	.	.	.	.	.	.	Y	I	Y	A	F	D	N	V	A	F	P	.	.	Y	G	E	K	S	E	A	F	I	V	E	R	V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A	L
Query Conservation																.	.	.	.	.	.												.	.	.	.	.	.	.	.												.	.
Alig confidence					.	.	.	.								.	.	.	.	.	.												.	.	.	.	.	.	.	.												.	.																					.
Template Conservation					.	.	.	.																																																																		.
Template Sequence		L	G	L	.	.	.	.	I	G	G	X	S	W	E	S	T	I	P	Y	Y	R	X	I	N	Q	H	V	K	A	Q	L	G	G	L	H	S	A	K	I	I	L	Y	S	V	D	F	H	E	I	E	Q	L	Q	A	K	G	D	W	Q	T	A	A	Q	L	L	S	N	A	A	I	S	L	.	K	H	A	G	A	E	V
Template Known Secondary structure					.	.	.	.				T	T																					T	T																					T	T																	.				T
Template Predicted Secondary structure					.	.	.	.																																																																		.
Template SS confidence
		5	.	.					.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.
Predicted Secondary structure																																																															.																	.
Query SS confidence																																																															.																	.
Query Sequence		A	V	V	A	C	N	T	A	S	T	V	S	L	P	A	L	R	E	K	F	D	F	P	V	V	G	V	V	P	A	I	K	P	A	A	R	L	T	A	N	G	I	V	G	L	L	A	T	R	G	T	V	K	R	S	Y	T	H	E	L	I	.	A	R	F	A	N	E	C	Q	I	E	M	L	G	S	A	E	.	M
Query Conservation																																																															.																	.
Alig confidence											.																																																				.																	.
Template Conservation											.
Template Sequence		I	V	V	C	T	N	T	X	H	.	K	V	A	D	D	I	E	A	A	C	G	L	P	L	L	H	I	A	D	A	T	A	V	Q	I	K	Q	Q	G	I	D	K	I	G	L	L	G	T	R	Y	T	X	E	Q	G	F	Y	R	G	R	L	T	E	K	H	G	I	E	V	I	T	P	D	D	T	D	R	E	A	V
Template Known Secondary structure					S	S	S	G	G	G	.	G	G									T	S		B														T	T								S							S	T	T	T
Template Predicted Secondary structure											.
Template SS confidence
		80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		V	E	L	A	E	A	K	L	H	G	E	.	.	.	D	V	S	L	D	A	L	K	R	I	L	R	P	W	L	R	M	K	E	P	P	D	T	V	V	L	G	C	T	H	F	P	L	L	Q	E	E	L	L	Q	V	L	P	E	G	T	R	L	V	D	S	G	A	A	I	A	R	R	T	A	W	L
Query Conservation													.	.	.
Alig confidence													.	.	.																.	.																							.	.	.	.
Template Conservation																															.	.																							.	.	.	.
Template Sequence		N	R	I	I	Y	E	E	L	C	L	G	I	I	S	E	T	S	R	D	A	Y	R	R	V	I	K	K	L	E	.	.	A	Q	G	V	Q	G	I	I	F	G	C	T	E	I	T	L	L	V	N	A	Q	D	.	.	.	.	A	S	V	P	V	F	D	T	T	A	I	H	A	S	A	A	A	D	Y
Template Known Secondary structure								T	G	G	G	T																			.	.		T	T		S						S	T								G	G	G	.	.	.	.		S	S
Template Predicted Secondary structure																															.	.																							.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions