Job Description P22634 Confidence 30.74% Date Thu Jan 5 11:39:02 GMT 2012 Rank 199 Aligned Residues 120 % Identity 15% Template c3lftA_ PDB info PDB header:structure genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the abc domain in complex with l-trp from2 streptococcus pneumonia to 1.35a Resolution 1.35 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																.	.																	.	.	.	.	.	.
Query SS confidence																.	.																	.	.	.	.	.	.
Query Sequence		P	R	P	T	V	L	V	F	D	S	G	V	G	G	.	.	L	S	V	Y	D	E	I	R	H	L	L	P	D	L	H	Y	.	.	.	.	.	.	I	Y	A	F	D	N	V	A	F	P	Y	G	E	K	S	E	A	F	I	V	E	R	V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A	L	A	V	V	A
Query Conservation																.	.																	.	.	.	.	.	.
Alig confidence																.	.																	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.														.
Template Sequence		S	N	A	K	I	G	V	L	Q	F	V	S	H	P	S	L	D	L	I	Y	K	G	I	Q	D	G	L	A	E	E	G	Y	K	D	D	Q	V	K	I	D	F	X	N	S	E	G	D	Q	.	.	.	.	.	.	.	.	.	.	S	K	V	A	T	X	S	K	Q	L	V	A	N	.	G	N	D	L	V	V	G	I
Template Known Secondary structure												S																			T	T			G	G	G									T	T			.	.	.	.	.	.	.	.	.	.											T	T	S	.	S		S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.											.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																												.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		C	N	T	A	S	T	V	S	L	P	A	L	R	E	K	F	D	F	P	V	V	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	A	I	K	P	A	A	R	L	T	.	.	A	N	G	I	V	G	L	L	A	T	R	G	T	V	K	R	S
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence										.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation										.
Template Sequence		A	T	P	A	A	Q	G	L	.	A	S	A	T	K	D	L	P	V	I	X	A	A	I	T	D	P	I	G	A	N	L	V	K	D	L	K	K	P	G	G	N	V	T	G	V	S	D	H	N	P	A	Q	Q	Q	V	E	L	I	K	A	L	T	P	N	V	K	T	I	G	A	L	Y	S	S	S	E	D	N	S	K
Template Known Secondary structure		S								.					S	S	S						S		S		T	T	T	T	T	S		S		S	S				S	S																						T	T										T	T
Template Predicted Secondary structure										.
Template SS confidence
		118	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	H	E	L	I	A	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	V	E	E	F	K	A	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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