Job Description P22634 Confidence 53.56% Date Thu Jan 5 11:39:02 GMT 2012 Rank 99 Aligned Residues 67 % Identity 15% Template c3l0oB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:transcription termination factor rho; PDBTitle: structure of rna-free rho transcription termination factor from2 thermotoga maritima Resolution 2.35 Å

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		22	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.																						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure								.																	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	V	L	V	F	.	D	S	G	V	G	G	L	S	V	Y	D	E	I	R	H	L	.	.	.	.	L	P	D	L	H	Y	I	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	N	V	A	F	P	Y	G	E	K	S	E	A	F	I	V	E	R	V	V	A	I
Query Conservation								.																	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																																																																								.	.
Template Sequence		Q	R	G	M	I	V	A	P	P	K	A	G	K	T	T	I	L	K	E	I	A	N	G	I	A	E	N	H	P	D	T	I	R	I	I	L	L	I	D	E	R	P	E	E	V	T	D	I	R	E	S	T	N	A	I	V	I	A	A	P	F	D	M	P	P	D	K	Q	V	K	.	.	V	A	E	L	T	L	E	M
Template Known Secondary structure										T	T	S	S																	T	T	S																			T	T	S		S							T	T	S								.	.
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	V	Q	E	R	Y	P	L	A	L	A	V	V	A
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		A	K	R	L	V	E	F	.	N	Y	D	V	V	I	L	L
Template Known Secondary structure								T	.	T
Template Predicted Secondary structure									.
Template SS confidence
		254	.	.	.	.	.	260		.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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