Job Description P22634 Confidence 29.75% Date Thu Jan 5 11:39:02 GMT 2012 Rank 206 Aligned Residues 163 % Identity 10% Template c3kg2A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:glutamate receptor 2; PDBTitle: ampa subtype ionotropic glutamate receptor in complex with competitive2 antagonist zk 200775 Resolution 3.60 Å

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		23	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		T	V	L	V	F	.	.	D	S	G	V	G	G	L	S	V	Y	D	E	I	R	H	L	L	P	D	L	H	Y	I	Y	A	F	D	N	V	A	F	P	Y	G	E	K	S	E	A	F	I	V	E	R	V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A	L	A	V	V	A	C	N	T	A	S	T	V	S	L
Query Conservation							.	.
Alig confidence							.	.																																				.	.	.	.	.	.															.
Template Conservation																																												.	.	.	.	.	.															.
Template Sequence		Q	I	G	G	L	F	P	R	G	A	D	Q	E	Y	S	A	F	R	V	G	M	V	Q	F	S	T	S	E	F	R	L	T	P	H	I	D	N	L	E	V	A	N	.	.	.	.	.	.	S	F	A	V	T	N	A	F	C	S	Q	F	S	R	.	G	V	Y	A	I	F	G	F	Y	D	K	K	S	V	N	T	I
Template Known Secondary structure									T	T															T			S	S												T	T		.	.	.	.	.	.														T	.	T		S								T	T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.															.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.																			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		P	A	L	R	E	K	F	D	F	P	V	V	G	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	I	K	P	A	A	R	L	T	A	N	G	I	V	G	L	L	A	T	R	.	.	G	T	V	K	R	S	Y	T	H	E	L	I	A	R	F	A	N	E	C	Q	I	E	M	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		T	S	F	C	G	T	L	H	V	S	F	I	T	P	S	F	P	T	D	G	T	H	P	F	V	I	Q	M	R	P	D	L	K	G	A	L	L	S	L	I	E	Y	Y	Q	W	D	K	F	A	Y	L	Y	D	S	D	R	G	L	S	T	L	Q	A	V	L	D	S	A	A	E	K	K	W	Q	V	T	A	I	N	V
Template Known Secondary structure								T	T							S				S	S			S	S					S														T	T		S								G	G	G		T													T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	A	E	M	V	E	L	A	E	A	K	L	H	G	E	D	V	S	L	D	A	L	K	R	I	L	R	P	W	L	R	M	K	E	P	P	D	T	V	V	L	G	C	T
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		G	N	I	.	.	.	.	.	.	.	.	.	.	.	N	N	D	K	K	D	E	T	Y	R	S	L	F	Q	D	L	.	.	E	L	K	K	E	R	R	V	I	L	D	C	E
Template Known Secondary structure		S	S		.	.	.	.	.	.	.	.	.	.	.		S	S	S	T	T	T	T	T	T	T					T	.	.	T	T	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		166	.	.												.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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