Job Description P22634 Confidence 100.00% Date Thu Jan 5 11:39:02 GMT 2012 Rank 2 Aligned Residues 260 % Identity 27% Template c3hfrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of glutamate racemase from listeria monocytogenes Resolution 2.30 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	R	P	T	V	L	V	F	D	S	G	V	G	G	L	S	V	Y	D	E	I	R	H	L	L	P	D	L	H	Y	I	Y	A	F	D	N	V	A	F	P	Y	G	E	K	S	E	A	F	I	V	E	R	V	V	A	I	V	T	A	V	Q	E	R	Y	P	L	A	L	A	V	V	A	C	N	T	A	S	T	V
Query Conservation
Alig confidence																																																																		.
Template Conservation																																																																		.
Template Sequence		A	X	K	Q	A	I	G	F	I	D	S	G	V	G	G	L	T	V	V	R	E	V	L	K	Q	L	P	H	E	Q	V	Y	Y	L	G	D	T	A	R	C	P	Y	G	P	R	D	K	E	E	V	A	K	F	T	W	E	X	T	N	F	L	V	D	R	.	G	I	K	X	L	V	I	A	C	N	T	A	T	A	A
Template Known Secondary structure												S	S	S	T	T												T	T									G	G	G				T	T	S																				.									S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		S	L	P	A	L	R	E	K	F	D	F	P	V	V	G	V	V	.	P	A	I	K	P	A	A	R	L	T	A	N	G	I	V	G	L	L	A	T	R	G	T	V	K	R	S	Y	T	H	E	L	I	A	R	F	A	N	E	C	Q	I	E	M	L	G	S	A	E	M	V	E	L	A	E	A	K	L	H	G	E	D
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		A	L	Y	D	I	R	E	K	L	D	I	P	V	I	G	V	I	Q	P	G	S	R	A	A	L	K	A	T	R	N	N	K	I	G	V	L	G	T	L	G	T	V	E	S	X	A	Y	P	T	A	L	K	G	L	N	R	R	V	E	V	D	S	L	A	C	P	K	F	V	S	V	V	E	S	G	E	Y	K	S	A
Template Known Secondary structure											S	S					S													S	S	S														T											T	T									T	T							T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		V	S	L	D	A	L	K	R	I	L	R	P	W	L	R	M	K	E	P	P	D	T	V	V	L	G	C	T	H	F	P	L	L	Q	E	E	L	L	Q	V	L	P	E	G	T	R	L	V	D	S	G	A	A	I	A	R	R	T	A	W	L	L	E	H	E	A	P	D	A	K	S	A	D	.	A	N	I	A	F	C
Query Conservation																																																																											.
Alig confidence															.	.																																																											.
Template Conservation															.	.
Template Sequence		I	A	K	K	V	V	A	E	S	L	L	P	L	.	.	K	S	T	K	I	D	T	V	I	L	G	C	T	H	Y	P	L	L	K	P	I	I	E	N	F	X	G	D	G	V	A	V	I	N	S	G	E	E	T	A	S	E	V	S	A	L	L	D	Y	H	N	L	L	D	A	T	D	E	E	I	E	H	R	F	F
Template Known Secondary structure												G	G	G	.	.	G	G	S									S	T	T	G	G	G	G										T	T	S					T															T	T		S
Template Predicted Secondary structure															.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		M	A	M	T	P	G	A	E	Q	L	L	P	V	L	Q	R	Y	.	.	.	G	F	E	T	L	E	K	L	A	V
Query Conservation																			.	.	.
Alig confidence			.	.															.	.	.
Template Conservation			.	.
Template Sequence		T	.	.	T	G	S	T	Q	I	F	K	D	I	A	K	D	W	L	N	X	P	D	X	T	V	E	H	I	K	L
Template Known Secondary structure			.	.	S	S													S	S		T	T
Template Predicted Secondary structure			.	.
Template SS confidence
		237			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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