Job Description P22634 Confidence 71.79% Date Thu Jan 5 11:39:02 GMT 2012 Rank 64 Aligned Residues 113 % Identity 19% Template c3a5dB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:v-type atp synthase alpha chain; PDBTitle: inter-subunit interaction and quaternary rearrangement2 defined by the central stalk of prokaryotic v1-atpase Resolution 4.80 Å

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		22	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.								.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure								.																																																							.	.	.	.	.	.	.
Query SS confidence								.																																																							.	.	.	.	.	.	.
Query Sequence		P	T	V	L	V	F	.	D	S	G	V	G	G	L	S	V	Y	D	E	I	R	H	L	L	P	D	L	H	Y	I	Y	A	F	D	N	V	A	F	P	Y	G	E	K	S	E	A	F	I	V	E	R	V	V	A	I	V	T	A	V	Q	E	.	.	.	.	.	.	.	R	Y	P	L	A	L	A	V	V	A	C	N
Query Conservation								.																																																							.	.	.	.	.	.	.
Alig confidence								.																												.	.	.	.	.	.							.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.							.	.	.	.	.
Template Sequence		G	T	A	A	I	P	G	P	F	G	S	G	K	T	V	T	Q	Q	S	L	A	K	W	S	N	A	D	V	V	V	Y	V	G	C	.	.	.	.	.	.	G	E	R	G	N	E	.	.	.	.	.	M	T	D	V	L	V	E	F	P	E	L	T	D	P	K	T	G	G	P	L	M	H	R	T	V	L	I	A	N
Template Known Secondary structure									S	T	T	S	S												S	S		S								.	.	.	.	.	.	S			T	T	T	.	.	.	.	.	T					T	T	G	G	G				T	T	T	T			G	G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.							.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	S	T	V	S	L	P	A	L	R	E	K	F	D	F	P	V	V	G	V	V	P	A	I	K	P	A	A	R	L	T	A	N	G	I	V	G	L	L	A	T	R	G	T	V	K	R	S	Y	T	H	E	L	I	A	R	F	A
Query Conservation
Alig confidence																	.	.	.	.	.	.										.
Template Conservation																	.	.	.	.	.	.										.
Template Sequence		T	S	N	M	P	V	A	A	R	E	A	S	I	Y	V	.	.	.	.	.	.	G	V	T	I	A	E	Y	F	R	.	D	Q	G	F	S	V	A	L	M	A	D	S	T	S	R	W	A	E	A	L	R	E	I	S	S	R	L	E
Template Known Secondary structure			T	T	S												.	.	.	.	.	.										.		T	T								S																T	T
Template Predicted Secondary structure																	.	.	.	.	.	.										.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.							.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions