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Job DescriptionP22634
Confidence100.00%DateThu Jan 5 11:39:02 GMT 2012
Rank12Aligned Residues208
% Identity18%Templatec2zskA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:226aa long hypothetical aspartate racemase; PDBTitle: crystal structure of ph1733, an aspartate racemase2 homologue, from pyrococcus horikoshii ot3
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30...... ...40........ .50.........60.........70.........80........
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Query Sequence  TVLVFDSGVGGLSV. . . . . . YDEIRHLLPDLH. . . . . . . . YIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALA
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Template Sequence  KIGI. . . . IGGTTPESTLYYYKKYIEISREKFEKYFYPELIIYSINFKEFFQNPEGWEGRKKILINAAKAL. ERAGAELI
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   3... ...10.........20.........30.........40.........50.........60......... 70.......
 
   8990.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  VVACNTASTVSLPALREKFDFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMV. .
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Template Sequence  AFAANTPH. LVFDDVQREVNVPMVSIIDAVAEEILKRGVRKVLLLGTKTTMTADFYIKTLEEKGLEVVVPNDEEKEELNR
Template Known Secondary structure  SSSGGG.GG
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   78.80..... ....90.........100.........110.........120.........130.........140.........150......
 
   167..170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  ELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEH
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Template Sequence  IIFEELAFGNLKNKEWIVRLIEKYRE. SEGIEGVILGCTELPLAIKQGD. . . . VSVEVFDSAEIHMRKLIELASE
Template Known Secondary structure  TGGGT

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   157..160.........170.........180.. .......190.........200.... .....210.........220......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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