Return to main results Retrieve Phyre Job Id

Job DescriptionP22634
Confidence23.38%DateThu Jan 5 11:39:02 GMT 2012
Rank257Aligned Residues42
% Identity19%Templatec2xznU_
PDB info PDB header:ribosomeChain: U: PDB Molecule:ribosomal protein l7ae containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
Resolution3.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.... .....100.........110....
Predicted Secondary structure 







...






Query SS confidence 






















. . .



















Query Sequence  VVAIVTAVQERYPLALAVVACNT. . . ASTVSLPALREKFDFPVVGV
Query Conservation         
    
 
 






...

  


 

    





Alig confidence 







.













...



















Template Conservation    
  


.    
 




 
  
      
  

 
  

 
 
Template Sequence  LHEVLRTI. EAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSV
Template Known Secondary structure  .T

SSS

STTTT

Template Predicted Secondary structure  .











Template SS confidence 













































   2930...... ...40.........50.........60.........70...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions